Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01182 ATGGATGGTGAAGCAGGAGATTGGAATTCTGAAGGAGACTCTACATTGACTAGTTGTAATTCACGATCTTCCATGCCGAATGAGCCAAACAAAATTAGTGAATGCATAGAGGAGAAAGAACTTGGTTCATTCATGGCAGTGAGTGGAAGCGTGAGCGGAAGATTAGACGTAACAACCGGAAGCTCAAGTCAAGAATGCTTGCCAATTGTTTCTCATGAACACAAGGTGGTCTTCATGGATGTCTGTACAAGTATGGATGGTTATGAAGCTGCAATGCGTATTAATAAGAAGTATAAGAAACACCAAGATAGACCGCTAATCGTTGCTCTTACCGGAAACACCAGCAAGCTGGTAAAGGAGAACTCTATGAGGGTTGGTATGGATGGCCTCATACTGAAACCTGTTTCTGTTGATAAAATGAGAGGTGTTCTATTAGAACTTTTAGAACATGGGTTCTATTTGAAACGGTTTAAGCAGCCAGATTGGCTTCAAATTGTGAGAGCTTGTGTACATACTCAAATGAAATTAGAAGTTCTATG 539 0.4063 MSCIRVSRTVIKGLLVHLGLDVTTGSSSQECLPIVSHEHKVVFMDVCTSMDGYEAAMRINKKYKKHQDRPLIVALTGNTSKLVKENSMRVGMDGLILKPVSVDKMRGVLLELLEHGFYLKRFKQPDWLQIVRACVHTQMKLEVL 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01182 144 Pfam Response regulator receiver domain 7 106 IPR001789 GO:0000160
Bva01g01182 144 Gene3D - 5 121 - -
Bva01g01182 144 SMART REC_2 4 109 IPR001789 GO:0000160
Bva01g01182 144 SUPERFAMILY CheY-like 6 114 IPR011006 -
Bva01g01182 144 ProSiteProfiles Response regulatory domain profile. 1 113 IPR001789 GO:0000160
Bva01g01182 144 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 5 119 - -
Bva01g01182 144 PANTHER ETHYLENE RECEPTOR 1-LIKE 5 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01182 Bva-Chr1 10795843 10797668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01182 6 114 Miscellaneous Gene Families AT1G66340 60.360 5.92e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva01g01182 Response_reg 7.4e-09 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01182 K14509 - gmx:100795340 175.637