Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01146 atgttaaagaaattatatttaagtgGAAACTCCTTCACAGGTTCTATACCAAAGGAGATTGATGAAGGACAATCGAAAACACATACCAATACTTTAGCTACACTTGGCTACATTGCAccagAGTATGGATTCAAGGGAACTATTTCTATAAAAGGAGATGTCTACAGTTATGGGATCCTAATGTTGGAAATGTTCACAAGAAAAAAGCCCACAGATGACATGTTTTCAGCAAGATTGAGCCTGAAAAGCTGGGTAATAGATTTGATGCCGCAAGTTACAGAAATTGTAGACTCCAATTTACtccaaaaaaaagaacaactgTTTGATGACATAATAACATACACATCAACCATTTTGGAGTTGGGGCTCAATTGTTGTGCAGATTTGCCAGAAGCACGAATTAGTATGACGGATGTGGTCGCATCATTGAACAAAATCAAGATGGCTTTTATGCATAACGCAATGTATAAGGCCACAAAATA 482 0.3402 MLKKLYLSGNSFTGSIPKEIDEGQSKTHTNTLATLGYIAPEYGFKGTISIKGDVYSYGILMLEMFTRKKPTDDMFSARLSLKSWVIDLMPQVTEIVDSNLLQKKEQLFDDIITYTSTILELGLNCCADLPEARISMTDVVASLNKIKMAFMHNAMYKATK 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01146 160 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 21 154 - -
Bva01g01146 160 Pfam Protein tyrosine and serine/threonine kinase 20 143 IPR001245 GO:0004672|GO:0006468
Bva01g01146 160 Gene3D Transferase(Phosphotransferase) domain 1 12 158 - -
Bva01g01146 160 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR ISOFORM X1 21 154 - -
Bva01g01146 160 ProSiteProfiles Protein kinase domain profile. 1 151 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01146 160 SUPERFAMILY Protein kinase-like (PK-like) 25 153 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01146 Bva-Chr1 9931379 9935307 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01146 33 150 Receptor kinase-like Gene Family AT3G47580 41.176 1.90e-24 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva01g01146 PK_Tyr_Ser-Thr 2e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01146 - K13420 gmx:100784397 175.637