Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01124 atgataatgAAGTATTacttcaaaaaagaaagaaaagacaagaaaacaaaagacaaaTCAAAAGCAAGTgaaattccattttattttttcaacatgTCTTCAATAAGAGTATTCCGTCTCCATAACAATAATTTACATGGTAGTCTCCCACAAGAGTTGTGCCATTATCTTCCTCAACTAGAAATTTTTgacatatcatataattactttgatgGAAATATCCCAAGACAAATTGACAATTGCACATTGCTGAAGAAATTATGTTTAGCAGAGAACTCCTTCACAGGTTCTATACCAAAGGAGATAGGTGTCCTTAGTAACCTTGAGATGCTTCAGTTGTTTGATAACGATTTGAGCGGACTGATTCCAcggaatatttttaatatgtcaaGTTTAATATACTTGTATCTCAATAACAATTCCTTGTCAGGTAGTCTTCCAAAAGATATGGGATGTGGTCTTCCCAatctaaaatatctatttctatatgaaaataaacttgTTGGAAACATTCCAAATAGCATATCCAATGCTTCTGAGCTCAATAATTTAGAACTGAATTCCAATAAATTCAGTGGAACAATACCTAGCACACTTGGAAATCTAAGGAACCTCGAGTTTCTCCAGTTAGAAGGCAATAATTTCACCACAGGTGCTCACACTTCTGAGTTGGACTTCCTTACATCATTGACAAATTGCAGGAAGTTGAAATATCTCATCTTACCGAACAATTCTTTCTATGGAAAGCTTCCTAAGTCAATCGGAAACTTCTCTACTTCTTTACTATACTTTGATGCTTCTTTTTGCAAAATTGATGGCAACATTCCACTTGAATTGGGAAATTTAAGCAACTTGTTAGATTTCAAGCTGGAAGGGAATAATTTGAGTGGACACATTCCAAAAACCATAAATGGATTGCAAAACCTTCAAGGAATGACTCTGAGCGATAATGCACTGCAGGGCTCTATCATTGATGAAATCTGTGAAATTAGAAGTTTGAATGTTTTGTCTCTTGGTGGAAATAAGTTTTCCGGGATGATACCAGCATGTTTAGGGAATCTTACTTCTTTAGGATACCTTTATGTGGACTCTAACAAACTAACTTCTGTGATACCCTCATCTCTTTGGTCACTCAAGGATATCCTAAGAGTCAATTTGTCCTCAAATGCATTAACTGGAGTTCTTCCATATGAGATCCAGAATTGGAGAGCTATTACATGGATGGATTTGTCAAGAAATCAGATTTCAGGTAGCATTCCTACAACCATTGGTGGATTGCAAACATTGGAAAGCCTCTCTTTAGCTCATAACAAAATTGAAGGACCTATTCCAGAATCGCTTGGTGAAATAGTAAGCCTGCAGGGCTTGGATCTTGCACAAAACAATCTGTCTGGTGTGATtccaaaatctttaaaattacttcgtgatctaaaatttattaatctttcTTACAATAGATTAGAAGGGGAGATTCCAAGTGGTGGacctttcaaaaattttacagCTCAATCATTTATGCATAATGAGGCACTTTGTGGCAATCCAAGGCTGCAAGTCCCACCATGTAGGGAAAAAACAAGGCATGGGTTGAATCTTCTTTGGATCAAAATCGTACTGCCCATCATTTTGTCAACCATTTTGGTAAGTTTCTGCATAATCCTTCTattatggaaaagaaaacttgttgGTAATCCGGCTCAAAGGGAATTATCAACTTTAGGAGTACCCAGGCGCATCTCGTATTATGAACTTGTGAAAGCAACTAGTGGATTTGACGAGAGTAATCTAATTGGGAAGGGCAGTTTTGGTTCTGTTTATAAAGGCATGCTTTCAAATGGGATGATGGTTGCAGTTAAAGTGtttaatttgagtttggaAGCTTCTTCAAAGAGCTTTGATGTAGAATGTGATGCAATGTGCAATTTACGTCATCGCAATCTCGTTAAGCTCATCACTAGTTGTTTCAATGATGATTTCAAAGCTTTGATCATGGagttcatgccaaatggaagcATTGAAAATTGGTTGTATTCACATAACAATTTTTTGGATTTCCTACAAAGGTTGAATATAATGATTGATGTGGCATCGGCATTAGAATATCTCCATCATAGTTCTCCAATATCGGTGGTTCATTGTGACATCAAGCCTAGCAATATTTTGCTAGATGAAAACAAGGTTGCACATGTTGCTGATTTTGGCATCGCCAAACTCTTAGACGAAGGACAATCTAAAACACATACCAATACTTTAGCTACACTTGGCTACATTGCAccagAGTATGGATCCAAGGGAACTATTTCTATAAAAGGAGATGTCTACAGTTATGGGATCCTAATGTTGGAAATGTTCACAAGAAAAAGGCCAACAGATGACATGTTTTCAGCAGGATTGAGCCTGAAAAACTGGGTAATAGATTTGATGCCACAAGTTACAGAAATTTTAGACTCCAATTTGCTCCAACAAGAGCAACAGTTGTTTGATGATATAAAAAGATATGCATCAACCATTTTGAAGTTGGGGCTCAATTGTTGTGCCGATTTGCCAGAAGCACGTATAAGCATGACAGATGTGGTCGCATCATTGAACAAAATCAAGATGGCATTCATGCATACGGCAATGGAAAAGGCCACAAAATA 2639 0.3376 MIMKYYFKKERKDKKTKDKSKASEIPFYFFNMSSIRVFRLHNNNLHGSLPQELCHYLPQLEIFDISYNYFDGNIPRQIDNCTLLKKLCLAENSFTGSIPKEIGVLSNLEMLQLFDNDLSGLIPRNIFNMSSLIYLYLNNNSLSGSLPKDMGCGLPNLKYLFLYENKLVGNIPNSISNASELNNLELNSNKFSGTIPSTLGNLRNLEFLQLEGNNFTTGAHTSELDFLTSLTNCRKLKYLILPNNSFYGKLPKSIGNFSTSLLYFDASFCKIDGNIPLELGNLSNLLDFKLEGNNLSGHIPKTINGLQNLQGMTLSDNALQGSIIDEICEIRSLNVLSLGGNKFSGMIPACLGNLTSLGYLYVDSNKLTSVIPSSLWSLKDILRVNLSSNALTGVLPYEIQNWRAITWMDLSRNQISGSIPTTIGGLQTLESLSLAHNKIEGPIPESLGEIVSLQGLDLAQNNLSGVIPKSLKLLRDLKFINLSYNRLEGEIPSGGPFKNFTAQSFMHNEALCGNPRLQVPPCREKTRHGLNLLWIKIVLPIILSTILVSFCIILLLWKRKLVGNPAQRELSTLGVPRRISYYELVKATSGFDESNLIGKGSFGSVYKGMLSNGMMVAVKVFNLSLEASSKSFDVECDAMCNLRHRNLVKLITSCFNDDFKALIMEFMPNGSIENWLYSHNNFLDFLQRLNIMIDVASALEYLHHSSPISVVHCDIKPSNILLDENKVAHVADFGIAKLLDEGQSKTHTNTLATLGYIAPEYGSKGTISIKGDVYSYGILMLEMFTRKRPTDDMFSAGLSLKNWVIDLMPQVTEILDSNLLQQEQQLFDDIKRYASTILKLGLNCCADLPEARISMTDVVASLNKIKMAFMHTAMEKATK 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01124 879 ProSitePatterns Protein kinases ATP-binding region signature. 597 619 IPR017441 GO:0005524
Bva01g01124 879 Gene3D Phosphorylase Kinase; domain 1 574 666 - -
Bva01g01124 879 ProSitePatterns Serine/Threonine protein kinases active-site signature. 710 722 IPR008271 GO:0004672|GO:0006468
Bva01g01124 879 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 24 175 - -
Bva01g01124 879 Gene3D Ribonuclease Inhibitor 223 529 IPR032675 -
Bva01g01124 879 Gene3D Ribonuclease Inhibitor 17 222 IPR032675 -
Bva01g01124 879 SUPERFAMILY Protein kinase-like (PK-like) 571 862 IPR011009 -
Bva01g01124 879 SUPERFAMILY L domain-like 260 515 - -
Bva01g01124 879 SUPERFAMILY L domain-like 26 300 - -
Bva01g01124 879 PANTHER RECEPTOR-LIKE PROTEIN 55 24 175 - -
Bva01g01124 879 PANTHER RECEPTOR-LIKE PROTEIN 55 177 870 - -
Bva01g01124 879 PANTHER RECEPTOR-LIKE PROTEIN 55 93 199 - -
Bva01g01124 879 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 93 199 - -
Bva01g01124 879 ProSiteProfiles Protein kinase domain profile. 591 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01124 879 Pfam Leucine rich repeat 106 167 IPR001611 GO:0005515
Bva01g01124 879 Pfam Leucine rich repeat 357 415 IPR001611 GO:0005515
Bva01g01124 879 Pfam Leucine rich repeat 428 487 IPR001611 GO:0005515
Bva01g01124 879 SMART LRR_typ_2 129 153 IPR003591 -
Bva01g01124 879 SMART LRR_typ_2 202 225 IPR003591 -
Bva01g01124 879 SMART LRR_typ_2 154 178 IPR003591 -
Bva01g01124 879 SMART LRR_typ_2 474 498 IPR003591 -
Bva01g01124 879 SMART LRR_typ_2 354 378 IPR003591 -
Bva01g01124 879 SMART LRR_typ_2 450 473 IPR003591 -
Bva01g01124 879 SMART LRR_typ_2 330 353 IPR003591 -
Bva01g01124 879 SMART LRR_typ_2 282 306 IPR003591 -
Bva01g01124 879 SMART LRR_typ_2 32 56 IPR003591 -
Bva01g01124 879 Pfam Protein kinase domain 592 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01124 879 SMART serkin_6 591 870 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g01124 879 Gene3D Transferase(Phosphotransferase) domain 1 667 878 - -
Bva01g01124 879 PANTHER PROTEIN KINASE, PLANT-TYPE, PUTATIVE-RELATED 177 870 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01124 Bva-Chr1 9587349 9591692 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01124 25 873 Receptor kinase-like Gene Family AT3G47570 38.435 0.0 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva01g01124 Pkinase 3.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01124 - K13420 mtr:MTR_6g040210 961.829