Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01116 ATGGACCCTGTAAATGCAAAGTTAGCATCCAATCTTCATGAGTATGGATCGAAGGGAACTATTTCTATAAAAGGAGATGTCTACAGTTATGGGATCTTGATGTTGGAAATGTTCACAAGAAAAAAGCCCACAGATGACATGTTTTCAGGAGGACTGAGCCTGAAAAATTGGGTAATAAATTTGATGCCGCAAGTCACAGAAATTATAGACTCCAATTTAATCCAACAAGAACAACAGTTGTTTGATGacataaaaagatatacatCAACCATTTTGGAGTTGGGGCTCAATTGTTGTGCAGATTTGCCAGAAGCACGTACAAGCATGACGGATGTGGTTGTATCATTGAACAAAATCAAGATGGCATTTAGGCATAAGGCAATATA 386 0.3679 MDPVNAKLASNLHEYGSKGTISIKGDVYSYGILMLEMFTRKKPTDDMFSGGLSLKNWVINLMPQVTEIIDSNLIQQEQQLFDDIKRYTSTILELGLNCCADLPEARTSMTDVVVSLNKIKMAFRHKAI 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01116 128 Pfam Protein tyrosine and serine/threonine kinase 17 115 IPR001245 GO:0004672|GO:0006468
Bva01g01116 128 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 14 125 - -
Bva01g01116 128 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 14 125 - -
Bva01g01116 128 SUPERFAMILY Protein kinase-like (PK-like) 14 121 IPR011009 -
Bva01g01116 128 Gene3D Transferase(Phosphotransferase) domain 1 6 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01116 Bva-Chr1 9460688 9461193 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01116 14 123 Receptor kinase-like Gene Family AT3G47580 38.739 5.14e-21 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva01g01116 PK_Tyr_Ser-Thr 2.2e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01116 - K13420 gmx:100784397 138.272