Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01100 ATGGCTGATCGCAGGAGGAAGAGTGTCGCCGTTATTGGAGTTGCTTCCATCCTCCTTGTGGCAATGGTAGCTGCCATTACCATTAGTCTAGAAAGCAAAGGCgaagacaagaaagaaaaacatgtcaATGAAGGTGCAGGTAATAGCCAGGGCCAGATATCAAGCTCTAAGAAGGACATTGAGATGCTTTGCCAACCAACAACTTACAAAGAAACCTGCCAAAAGACCATCTCCAAGGCTTCTAATGAAACCTCTGACCCTAAAGAGCTCATCAAAGCTGGGTTTGAAGCCAGTATTGGGGAGCTGAGAAACGTGATAAACAACTCCACACTCGATAAAAAAATCGCCAGGGACAACATGACCAGACAAGCCATGGATATCTGCAAGGAAGTCATGGACTACGCCGTGGACAATTTTCATCAATCAGCTAAAAAGTTGGATGCTTTTGATCCTAACAAGATTAATGAGTATGCTTATGATCTCAAGGTTTGGCTTGGAGCTACAATCTCACACCAACAAACATGTTTAGATGGGTTTGAGAATACAAATAGTGAAGCTGGGCAAACAATGGCCAAAGCATTGAATATATCCATGGAGATGAGTAGTAATGCTCTTGCTATGGTTACTAATTTCCCAGATATGCTCAAGAATTATTACAACATAAGTATAAACCGAAAGCTTGATTCTCTTACCGGTATGGCGGATAATGGAGACGATTTCCCTACGTGGGTGAGTGAAGGGCAGAGAAGGCTCCTTCAGGTTGGTCTAGATGGGGTGATATTTAATGTCACTGTGGCTCAAGATGGGAGTGGCAATTTCAGGACACTCACTGAGGCTCTTCAAACTGTGACCCCAAAAAATGCTGTTCCCTTTGTGATTTATGTGAAGGCTGGTTTATATGATGAAATTGTGAGAGTGGAGAAAACCATGACTCATGTCACTATTATTGGAGATGGCCCCACGAAGACCAGGTTCACTGGTAGACTCAACTTTGTAGATGGCCAGCAAACTTACTATACTGCAACATTCGGCGTGAATGGTGCTTTCTTCACTGCAAAGAACGTTGGATTTGAGAACACGGCAGGGCCTGAGAAGCACCAAGCCGTTGCACTCCGTGTAACTGCAGACAACTGTGTTTTCTACAACTGCATCATGGATGGTTACCAAGACACCCTCTATGTCCAATCTCAACGCCAATTCTACCGTGATTGCACCATTACTGGCACCGTCGACTTCATCTTTGGTGATGCAGAAGCAGTTTTCCAGAACTGCAGGCTCATAGTGAGAAAACCCTCTCCTAACCAACAATGCATTGTGACAGCAGGTGGCAGAAAAGATATCAATTCAAAAAGTGGCCTAGTTTTCCAGAGCTGCCATTTCACAGCAGAGCCGGCATATATTGCCGACAAAGGACCCAATGTAGCTTCTTATCTGGGAAGGCCATGGAAGCAATATGCAAAGACTGTCATCATGGATTCTCTAATTGACGCCATTTTTGAGCCTCAAGGGTTTTTCCCATGGGCTGGAGCTAATAACCATGAGACTTGCTTCTATTTTGAGTACAACAACAAGGGTCCTGGTGCTGACACCACTATGAGAGTTAAATGGGCGGGTGTCAAAGTGCTTAGTGCAGTTGAAGCTAACGATTTCTATCCTCAGAAGTTCTATGAGCTTAAGGATGTAGGTGTTAAAGATTCATGGATCGTTGCTTCTGGAGTCCCATACTCTCCTGGTCCCATGCCCCTGCTTTTTTA 1754 0.439 MADRRRKSVAVIGVASILLVAMVAAITISLESKGEDKKEKHVNEGAGNSQGQISSSKKDIEMLCQPTTYKETCQKTISKASNETSDPKELIKAGFEASIGELRNVINNSTLDKKIARDNMTRQAMDICKEVMDYAVDNFHQSAKKLDAFDPNKINEYAYDLKVWLGATISHQQTCLDGFENTNSEAGQTMAKALNISMEMSSNALAMVTNFPDMLKNYYNISINRKLDSLTGMADNGDDFPTWVSEGQRRLLQVGLDGVIFNVTVAQDGSGNFRTLTEALQTVTPKNAVPFVIYVKAGLYDEIVRVEKTMTHVTIIGDGPTKTRFTGRLNFVDGQQTYYTATFGVNGAFFTAKNVGFENTAGPEKHQAVALRVTADNCVFYNCIMDGYQDTLYVQSQRQFYRDCTITGTVDFIFGDAEAVFQNCRLIVRKPSPNQQCIVTAGGRKDINSKSGLVFQSCHFTAEPAYIADKGPNVASYLGRPWKQYAKTVIMDSLIDAIFEPQGFFPWAGANNHETCFYFEYNNKGPGADTTMRVKWAGVKVLSAVEANDFYPQKFYELKDVGVKDSWIVASGVPYSPGPMPLLF 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01100 584 PANTHER PECTINESTERASE 5 580 - -
Bva01g01100 584 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 211 IPR035513 -
Bva01g01100 584 SUPERFAMILY Pectin lyase-like 262 557 IPR011050 -
Bva01g01100 584 MobiDBLite consensus disorder prediction 34 57 - -
Bva01g01100 584 PANTHER PECTINESTERASE 5 580 - -
Bva01g01100 584 SMART PMEI_2 55 207 IPR006501 GO:0004857
Bva01g01100 584 ProSitePatterns Pectinesterase signature 2. 406 415 IPR033131 -
Bva01g01100 584 CDD PMEI-like_3 63 212 - -
Bva01g01100 584 Pfam Pectinesterase 262 556 IPR000070 GO:0030599|GO:0042545
Bva01g01100 584 Pfam Plant invertase/pectin methylesterase inhibitor 60 207 IPR006501 GO:0004857
Bva01g01100 584 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 212 IPR035513 -
Bva01g01100 584 Gene3D - 260 580 IPR012334 -
Bva01g01100 584 TIGRFAM PME_inhib: pectinesterase inhibitor domain 55 209 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01100 Bva-Chr1 9106929 9109464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01100 2 575 Carbohydrate Esterase AT5G49180 46.021 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01100 K01051 - gmx:100784682 677.937