Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01097 ATGGTAGTTGGGGCGCcgcaacaacaacagcaaccAAATCCCCAATCACAACAGCAACAGCTGCAGCAGCAACATCAGCAGCTGCAGCAACCTATTCCTTCTGCGCAAGAGGAGGCTGTGAAGAGGAACACAGATTGCGTCTACTTTCTGGCCTCTCCCTTGACATGCAAAAAGGGTGGTGAATGCGAGTACCGCCATAGTGAATATGCCCGAGTTAATCCTAGGGATTGCTGGTACTGGCTGAATGGTAATTGCTTGAATCCGAAATGTTCATTTCGTCATCCGCCTCTTGATGGTTTCCTAGGAACACAGGCGACAACTCCTGGTGGATCAGCTGTGGCCCCATCACAAACCGCAACAACTACTGTAACACATCCTCATAATTCTAGTAAACAATCTGTACCTTGCATTTTCTTCCAAAAGGGTATTTGCTTGAAAGGTGACAAATGTGCCTTCTTGCATGGACCAAATCCTAGTACTGGTAATAAAGTTCCCCAGGTGCTGGTGGCTAATCAAGGTACTCAGTCTTTAGCAAATAAGAAAGCTTTCAGTGGGGGTATTGAAAAGATTACGCAAGAAAGGAGAATTCCCCAAGCAAACAATGCAAAGCCAGTTGGAAGTTCAGGAGCCAAACCTGTCCCAAAATTGCAAACTGCTTCACATAGAATAATTGAGAGGCATATGGCACTGCCTTCTACTCAATTTGATGATGAGGCTTCTGGGTTCAAGCAAACAAATGCTCCACGAGTTGCCAATGGATCGTTTGTTGCGCGGTCTAATTGTCCGAATCCAGGACACATGCTAGATGATTCTAATATCCATAATGGTAAGGACAATGATGAGTTTTTGACAGAATCCTCTCCTGGGTTTGATGTTCTTGTTGAGGATGAACTTATGAATTCGGATTACTACCATGGGGAAGATCAATTTGGAAAAGCAAGAGCTCAAGATGGAAGGAACTTGGATTCTGTTGATGAGTATGATTTAGGTCATTCTGCTGATTATAACTCTGTGGCTGATAATGATCGAGAAAGATTTCATGCACCTCAAGGCTATGACTCATATGACCACATGCAAGAACCATATGCTTGGGGACAGCAAAGGAATTCTTCGGAGAGAATCTTTGGTGCCTCGGCCTATTCAGAAAGGAGGAGTCGCCACAAATCTGACAGTCCTGAAAATGTTGAGGTCTCAGATCTACGACATCAGTTATCCAAGCGTAGGAGGGTCAATGGTTTGAAATCTGTTGTCAGTAATGATTATTATGACCTTGACAGCCATGGTGAAGAGCAAAGCTACCAAATCTCTTCTCGAAAGGATTCCCACCAATTGCCTCCAAATGAAATCGCTGTAAGCAGTCGCTTCCGAGGCAGAATCAAGCTTCCAGTAAATGGTAGTGATGACTACCAAGAGAGGGAATCTGACAGAACCAGAAATAGGAGCAGATTGTCACCTGGAAGGCTACAGGGTCCTCACCCAGGAAGGCTCCGTGATAGGTTAAGAGGAAAGGTTCATGATGACTATGAGAGGAAAAACTTCAGGGAGAGACCATTGATGAGGGAAATAATGGGTGATGAAAGTGCTGATTTTGCTGGGCCAAAGAGTCTTGCTGAACTGAAAGGTGGAAGGAGCGCAGAGAATAAGGAGCACCAGTCactaaagaagagaaagggtTTACAGGATTACCAACAACCTGAAGATGATCTTCAGTTTGAAGATCCAAAGCCTCTCAGTGAGATTCTGAAGGAGAAGAGAGGAGCTACTGGCAGAATAGCAGCCGCTGATAATAAAAGCCATAATAAGAAGAGTGAAGCTACAGATGACTCACATAATACAGTTGTCTCAGATACAGTAAACCCTACAAGTGTCTCACATAACACAGTTGTATCAGAAACAGAAAACGGGGTTTTGCCAAAGGATGAATCCGAATTTCAGGTGACTAATGCTTCTGGAAACAATATCAATAAGACATATTCAACACATGGTCAGTCTTCTGAAGATGGAATGATCTATGATGAAGGAATGGAAGAGCAAGAGTATGAAGGCGACGATCAAAGAGATGGGGATGGTGAGTATGATTATGAACAAGTTGATGAGggagaatataattatgagGAAGGTGAAAATCCAGAGCAGGAAGAATACGTGGATGATGAAGATGGGGATGATTTCGCAGAGAAGATCGGTGTTGTGCTTACCTA 2201 0.428 MVVGAPQQQQQPNPQSQQQQLQQQHQQLQQPIPSAQEEAVKRNTDCVYFLASPLTCKKGGECEYRHSEYARVNPRDCWYWLNGNCLNPKCSFRHPPLDGFLGTQATTPGGSAVAPSQTATTTVTHPHNSSKQSVPCIFFQKGICLKGDKCAFLHGPNPSTGNKVPQVLVANQGTQSLANKKAFSGGIEKITQERRIPQANNAKPVGSSGAKPVPKLQTASHRIIERHMALPSTQFDDEASGFKQTNAPRVANGSFVARSNCPNPGHMLDDSNIHNGKDNDEFLTESSPGFDVLVEDELMNSDYYHGEDQFGKARAQDGRNLDSVDEYDLGHSADYNSVADNDRERFHAPQGYDSYDHMQEPYAWGQQRNSSERIFGASAYSERRSRHKSDSPENVEVSDLRHQLSKRRRVNGLKSVVSNDYYDLDSHGEEQSYQISSRKDSHQLPPNEIAVSSRFRGRIKLPVNGSDDYQERESDRTRNRSRLSPGRLQGPHPGRLRDRLRGKVHDDYERKNFRERPLMREIMGDESADFAGPKSLAELKGGRSAENKEHQSLKKRKGLQDYQQPEDDLQFEDPKPLSEILKEKRGATGRIAAADNKSHNKKSEATDDSHNTVVSDTVNPTSVSHNTVVSETENGVLPKDESEFQVTNASGNNINKTYSTHGQSSEDGMIYDEGMEEQEYEGDDQRDGDGEYDYEQVDEGEYNYEEGENPEQEEYVDDEDGDDFAEKIGVVLT 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01097 733 MobiDBLite consensus disorder prediction 1 35 - -
Bva01g01097 733 PANTHER ZN-FINGER, C-X8-C-X5-C-X3-H TYPE-CONTAINING 23 732 - -
Bva01g01097 733 MobiDBLite consensus disorder prediction 610 633 - -
Bva01g01097 733 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 133 156 IPR000571 GO:0046872
Bva01g01097 733 MobiDBLite consensus disorder prediction 539 723 - -
Bva01g01097 733 PANTHER ZINC FINGER CCCH-TYPE-CONTAINING 11A 23 732 - -
Bva01g01097 733 SMART c3hfinal6 130 156 IPR000571 GO:0046872
Bva01g01097 733 SMART c3hfinal6 41 68 IPR000571 GO:0046872
Bva01g01097 733 SMART c3hfinal6 73 96 IPR000571 GO:0046872
Bva01g01097 733 MobiDBLite consensus disorder prediction 492 512 - -
Bva01g01097 733 MobiDBLite consensus disorder prediction 378 402 - -
Bva01g01097 733 MobiDBLite consensus disorder prediction 332 354 - -
Bva01g01097 733 Pfam Zinc-finger containing family 41 95 IPR041686 -
Bva01g01097 733 ProSiteProfiles Zinc finger C3H1-type profile. 130 157 IPR000571 GO:0046872
Bva01g01097 733 MobiDBLite consensus disorder prediction 428 512 - -
Bva01g01097 733 ProSiteProfiles Zinc finger C3H1-type profile. 71 97 IPR000571 GO:0046872
Bva01g01097 733 MobiDBLite consensus disorder prediction 379 402 - -
Bva01g01097 733 MobiDBLite consensus disorder prediction 541 609 - -
Bva01g01097 733 ProSiteProfiles Zinc finger C3H1-type profile. 41 69 IPR000571 GO:0046872
Bva01g01097 733 SUPERFAMILY CCCH zinc finger 131 155 IPR036855 GO:0046872
Bva01g01097 733 Gene3D - 120 183 - -
Bva01g01097 733 Gene3D - 32 97 - -
Bva01g01097 733 MobiDBLite consensus disorder prediction 465 482 - -
Bva01g01097 733 MobiDBLite consensus disorder prediction 641 666 - -
Bva01g01097 733 MobiDBLite consensus disorder prediction 337 351 - -
Bva01g01097 733 MobiDBLite consensus disorder prediction 670 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01097 Bva-Chr1 8996544 9002548 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Bva01g01097 zf-CCCH_3 2.9e-11 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01097 - - gmx:100787836 758.059
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g01097 01 8996544 9002548 Bva01g01097 01 8996544 9002548 ECH