Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01058 ATGGCTGCGGCTTTTATCAAGCTTGACGATTCCCCAATGTTTCAAAAGCAGATATGTTCTCTTGAACAAATGACTGATGAGTTAAAGGACCGCTGCCAGAAACTGTACAAAGGGTGTCAAAAGTTCATGACAGCTTTGGGAGAAGGATATAATGGGGAGATCTCCTTTGCAGACTCTTTAGAAGCATTTGGTGCTGGCCGCGATGATCCTGTTAGTGTATCAATTGGAGGACCTGTCATATCTAAGTTCATTTCTGCACTTCGTGAGCTTGCTACTTTTAAAGAGCTTCTTCGATCACAAGTAGAGCATGTGCTGATTGACCGGCTGACTGAGTTTATGACCATTGATTTGCAAGATGCTAAgGATTCTCGCCACCGTTTAGACAAAGCTGAATACTCTTATGATCAgGCACGTGAAAAGTTTGTCTCACTGAAGAAGAATACACGGGAAGACATTGTTGCTGAATTAGAAGAGGACCTACAAAATTCGAAGTCAGCATTTGAAAAAAGTCGCTTCAATCTAGTAAACTCACTCATGAATATTGAAGTGAAAAAGAAGTACGAGTTCTTGGAGTCCATTAGTGCAATAATGGATGCTCATCTGAGATATTTTAAGTTGGGTTATGACTTACTGAGCCAAATGGAACCCTACATTCACCAGGTACTAACATACGCACAACAATCTAAAGAACTGGCTAATCTTGAGCAAGACAAGCTTGCTAAACGGATCCAGGAATATAGAACACAAGCTGAGCTAGACAGCAATCAAGTTTCTAGCAATGCAGAACCTTTATCAGGTGCTGATGCCACTCGTGTTGTTGGTATGAATTCTTACAGAAGCTACGAAACAGTAATGCAATCTGCAAGCAGTGGTGAGGTTCAAACAATTAAACAGGGTTATCTATTAAAACGGTCATCAAGCTTGCGTGGTGATTGGAAGAGGAGCTATTTTGTACTTGATAACCAAgggaatttatattattacagAATGAAAGGAGTCAAAACTATGGGCTTCCATTCATATAATTATACTCGTACAACTGAACAGAACAGTGGCATGTTTGGTAGATTCCGTTCAAGGCACAAGAGAGGATCATCgttaaatgaagaaattctGGGATGTCGTGCAGTTGATCTGTCCACATCAACTCTTAAGATAGATGCAGAGGATACAGATCTACGACTTTGTTTCCGTATTATTTCTCCTTCCAAAACTTATACATTGCAGGCTGAAAATGAGGCTGATAGGAAGGACTGGATAAACAAAATCACTGGAGCTATTACATCACGTTTTAATTCTCAGTTTCTTCAACAGCCTCATCATGGTACATCACATCCAAAAGATAATAGCTCAGCAACTGGTGCTTCTTGGAATAATCAAGCACCAGATAGCTACAGATGTTTGACAGATGACTTATGTTCCATGAAAGTCAATAGTGTCTCTAAGATTTTAAGGGAAATCCCTGGGAATGATAAATGTGCTGAGTGCAATTCTCCTGAACCAGATTGGGCATCTTTAAACCTTGGCATATTGTTGTGTATTGAATGCTCTGGTGTTCATCGAAATCTTGGAGTTCATATCTCAAAGGTGAGATCTATAACATTAGACGTCAAGGTTTGGGAACCTACTGTTTTGGACTTGTTTCGTAATTTGGGTAATGCTTATTGTAACTCTGTCTGGGAGGGATTACTTCTACCTGACAATGAAAGAGCAGAATCAAATGCTCCTACAAAACCATGCCCTACAGATGCTTTTCAACAGAAGGAAAGGTACATCCATGCAAAGTACATAGAGAAATCGCTAATTGTCAGAGAAAAGGCTATTCCTGGAGTTCCTTGTGTTGCTGTAAAAATCTGGAAAGCAGTACTGGCTATAGATATACAAGAAGTGTATCGCCTTATTGTCATTTCAGACTCAAATTTGGTAAACACCAAATATGAAGATGTGTTTAACCATGCCGatgcaaaagaaatggaaattggATGTAAAACTGCTGAGGAGCCTCGGCATGATCCTGCTGCCAGTCTGCAAATTGAAGACCCTAGTGGACATTTGAACTGTCCCCAAGGTTGTACGTTATTGCATCTGGCATGTCAATCTGGAAGTACTCTCATGGTTGAATTGTTGCTCCAATTTGGTGCTGATGTAAACGTTTGTGACTTCCGCGGAAGGACTCCCTTGCACCATTGCATCTCTAGTGCGAAGAATTCATTGGCAAAGTTTCTACTTAGGagGGGCGCGAGACCATCACTTAAAGATGGTGAAGGACTCACTGCACTTGAAAGAGCCATGGAAATGGGAGCAATAACTGATGAAGAGCTATTTATATTGCTTTCTGAATGTTA 2345 0.3962 MAAAFIKLDDSPMFQKQICSLEQMTDELKDRCQKLYKGCQKFMTALGEGYNGEISFADSLEAFGAGRDDPVSVSIGGPVISKFISALRELATFKELLRSQVEHVLIDRLTEFMTIDLQDAKDSRHRLDKAEYSYDQAREKFVSLKKNTREDIVAELEEDLQNSKSAFEKSRFNLVNSLMNIEVKKKYEFLESISAIMDAHLRYFKLGYDLLSQMEPYIHQVLTYAQQSKELANLEQDKLAKRIQEYRTQAELDSNQVSSNAEPLSGADATRVVGMNSYRSYETVMQSASSGEVQTIKQGYLLKRSSSLRGDWKRSYFVLDNQGNLYYYRMKGVKTMGFHSYNYTRTTEQNSGMFGRFRSRHKRGSSLNEEILGCRAVDLSTSTLKIDAEDTDLRLCFRIISPSKTYTLQAENEADRKDWINKITGAITSRFNSQFLQQPHHGTSHPKDNSSATGASWNNQAPDSYRCLTDDLCSMKVNSVSKILREIPGNDKCAECNSPEPDWASLNLGILLCIECSGVHRNLGVHISKVRSITLDVKVWEPTVLDLFRNLGNAYCNSVWEGLLLPDNERAESNAPTKPCPTDAFQQKERYIHAKYIEKSLIVREKAIPGVPCVAVKIWKAVLAIDIQEVYRLIVISDSNLVNTKYEDVFNHADAKEMEIGCKTAEEPRHDPAASLQIEDPSGHLNCPQGCTLLHLACQSGSTLMVELLLQFGADVNVCDFRGRTPLHHCISSAKNSLAKFLLRRGARPSLKDGEGLTALERAMEMGAITDEELFILLSEC 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01058 781 SUPERFAMILY PH domain-like 225 427 - -
Bva01g01058 781 ProSiteProfiles Ankyrin repeat profile. 722 754 IPR002110 GO:0005515
Bva01g01058 781 Pfam BAR domain of APPL family 8 230 - -
Bva01g01058 781 Gene3D - 287 443 IPR011993 -
Bva01g01058 781 Gene3D Arf GTPase activating protein 469 608 IPR038508 -
Bva01g01058 781 PRINTS HIV Rev interacting protein signature 509 526 IPR001164 GO:0005096
Bva01g01058 781 PRINTS HIV Rev interacting protein signature 490 509 IPR001164 GO:0005096
Bva01g01058 781 PRINTS HIV Rev interacting protein signature 532 553 IPR001164 GO:0005096
Bva01g01058 781 PANTHER CENTAURIN/ARF 3 778 IPR045258 GO:0005096
Bva01g01058 781 ProSiteProfiles Ankyrin repeat profile. 689 721 IPR002110 GO:0005515
Bva01g01058 781 ProSiteProfiles Ankyrin repeat region circular profile. 722 753 - -
Bva01g01058 781 SMART 5bar 13 220 IPR004148 GO:0005515|GO:0005737
Bva01g01058 781 MobiDBLite consensus disorder prediction 437 456 - -
Bva01g01058 781 CDD ArfGap 482 596 - -
Bva01g01058 781 Coils Coil 120 147 - -
Bva01g01058 781 ProSiteProfiles Ankyrin repeat region circular profile. 689 720 - -
Bva01g01058 781 SUPERFAMILY Ankyrin repeat 689 769 IPR036770 -
Bva01g01058 781 ProSiteProfiles ARF GTPase-activating proteins domain profile. 478 609 IPR001164 GO:0005096
Bva01g01058 781 Pfam Ankyrin repeats (3 copies) 682 753 IPR002110 GO:0005515
Bva01g01058 781 Gene3D Arfaptin homology (AH) domain/BAR domain 7 252 IPR027267 -
Bva01g01058 781 SMART PH_update 295 430 IPR001849 -
Bva01g01058 781 ProSiteProfiles PH domain profile. 294 428 IPR001849 -
Bva01g01058 781 CDD BAR_SFC_plant 16 217 IPR035670 -
Bva01g01058 781 SMART arf_gap_3 478 609 IPR001164 GO:0005096
Bva01g01058 781 SUPERFAMILY BAR/IMD domain-like 8 317 IPR027267 -
Bva01g01058 781 Coils Coil 224 249 - -
Bva01g01058 781 Pfam Putative GTPase activating protein for Arf 480 601 IPR001164 GO:0005096
Bva01g01058 781 Gene3D - 674 780 IPR036770 -
Bva01g01058 781 ProSiteProfiles BAR domain profile. 3 227 IPR004148 GO:0005515|GO:0005737
Bva01g01058 781 SMART ANK_2a 722 751 IPR002110 GO:0005515
Bva01g01058 781 SMART ANK_2a 689 718 IPR002110 GO:0005515
Bva01g01058 781 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD2 3 778 - -
Bva01g01058 781 Pfam PH domain 296 427 IPR001849 -
Bva01g01058 781 SUPERFAMILY ArfGap/RecO-like zinc finger 480 602 IPR037278 -
Bva01g01058 781 CDD PH_ACAP 297 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01058 Bva-Chr1 8352924 8375608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01058 490 596 C2H2 Transcription Factor Family AT4G21160 40.741 1.76e-20 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01058 K12489 - gmx:100796006 1185.24