Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01033 atggtgacTGTGAAGTGCTCTTATACTGTTTTTCCCAGCCAACCTACACCAAAGGGTCCTTTCTGGTTGTCCGAGTGTGACCAAATCGCTCCTTGGACTCATGTACCCACCATTTGCGTGTACAAGCTGAAGCACAGCCACAACCATAAcattgatgattttgttgaGAGAATGAGAGAATCTCTCAGCAAAATCTTAGTTTACTACTACCCACTAGCCGGTCGAGTTCGGCGGATCGAAGGTGGCAGATTGGAATTGGACTGTAATGAAATGGGAGTGACCTTTTTGCAAGCTGAATCTCCAAAATCATTAGATGAATATGGTAATTTTGAACCCAACCACACCATTGCTGAGCTCCTTCCTAAAGTTGATTACAGCAAACCAGTTGAGGAGACTCCCTTGTTGCTGGCGCAATTGACAAGATTTAGTCTTGGTGGCCTTTCTCTTGGGCTTGCCGTTAATCATACTATTGTTGATGGgtcttctctttctcactTCGTCAACTCATGGGCCAAGCTTGCTCGTGGGGAAACattgaaggaagaagaaatgccATTCTTGGATCGAACTATTCTAAAAACTCCAAATCCAGTTGCAACACCACGTTTTGATCACAAATCGTATGAGTTCAAGCCATTGCCACTTATACTTGGTAGCTCTGACAACATAGCTGAGAGGAAAAAGGATACAAGTGTTGCATTATTGCCACTCACAAGAGATCAAGTGCTGAAGATAAAGAATAAGGCCAATGAAGAGAATACGGTGTCTTCTTCAGTGCGTGCCACTCGTCCTTATAGCAGATATGAAGCAATTGCTGCTCATATTTGGAGAACTGGTGCTAAAGCTCGAAAGCATGATGAGCATCAACCAACTGTAGTTCGATTTGTTGGCGATATTCGCAATAAATTGAAGCCGTCACTTCCTCGAAAATATTTTGGGAATGCTTTGCTAAGAACTGTGACTCCTATATGCACCAGTGGGGAAATCATATCAAACCCTTTATGTTATGCTGCCCAGAAAATTCAAGAAGCAATTGACAAGCTTACCGATGAGTACATGAGGTCTCAGCTAGATTTTCTAGCAAGTCAAGAGAAAGTAGATTGGTTAAGGGGCAGTTTGCACATCGTGGGAGGCTTGAATGGTTTATTTTATGGAAATCCCAATTTTTCTATAGTGAGCTGGTTGAGCATGCCTATGTATGAATTAGATTTTGGGTGGGGAAAACCACTGTATATGGGTCCAGGATCTTTAAATGAAGATGGCAAGACATTCATCATGCCAAGTCCCTCTGGAGATGGCTCTGTCATTGTTGCCCTGCGTTTACAGACAACTCATATGGAAGCCTTTCAAAGGTTCTTCTACGACGACATATCCATAGAATCTTCTGATATTATTAAGAGCAATTTGTG 1409 0.4067 MVTVKCSYTVFPSQPTPKGPFWLSECDQIAPWTHVPTICVYKLKHSHNHNIDDFVERMRESLSKILVYYYPLAGRVRRIEGGRLELDCNEMGVTFLQAESPKSLDEYGNFEPNHTIAELLPKVDYSKPVEETPLLLAQLTRFSLGGLSLGLAVNHTIVDGSSLSHFVNSWAKLARGETLKEEEMPFLDRTILKTPNPVATPRFDHKSYEFKPLPLILGSSDNIAERKKDTSVALLPLTRDQVLKIKNKANEENTVSSSVRATRPYSRYEAIAAHIWRTGAKARKHDEHQPTVVRFVGDIRNKLKPSLPRKYFGNALLRTVTPICTSGEIISNPLCYAAQKIQEAIDKLTDEYMRSQLDFLASQEKVDWLRGSLHIVGGLNGLFYGNPNFSIVSWLSMPMYELDFGWGKPLYMGPGSLNEDGKTFIMPSPSGDGSVIVALRLQTTHMEAFQRFFYDDISIESSDIIKSNL 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01033 469 Pfam Transferase family 1 454 - -
Bva01g01033 469 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 457 - -
Bva01g01033 469 Coils Coil 338 358 - -
Bva01g01033 469 Gene3D - 1 210 IPR023213 -
Bva01g01033 469 Gene3D - 219 456 IPR023213 -
Bva01g01033 469 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01033 Bva-Chr1 8059745 8061370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01033 2 455 Monolignol Biosynthesis Gene Families AT5G48930 38.681 6.75e-113 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01033 K13065 - qsu:111990517 506.138