Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01031 atggtgaCCGTGAAATGCTCTTATACCGTAGTTCCCAGTGAGCCTACTCCAAAGGGTCCTTTATGGTTGTCTGGcatcgaccaaatggctgctTGGACTCATATACCCACCCTTTACATTTACAAGCCAAACCAAAACcttgataattttgttgagaGAATGAGAGAATCTCTCAGCAAAATCTTAGTTCACTACTATCCACTAGCTGGTCAACTTCGGTGGATAGAACATAGCAGATTGGAATTAGACTGCAATGAAAAGGGAGCGACTTTGTTGCTTGCTGAATCTCCAAAAACTTTAGATGAATATGGCAATTTTGAACCCAACCATAGCATTACTGAGCTCTTTCCCCAGGTTGATTACAGCAAATCTATTGAGGAGACTCACTTGTTGCTGGCACAATTGACAAGATTCAGTTGTGGTGGCCTTTCTCTTGGGCTTGCCATGACCCATAGTTTGGTTGATGGGGTTTCTGCTATTCACTTTGTCAATTCATGGGCCAAGCTTGCTCGTGGGGAAACattgaaggaagaagaattgCCTTTCTTGGATCGAACTGTTATGAGAAGTGCAGATCCACCTGAAGCACCTCGTTTTGATCACAAAGCCAATGAGTTTATGCCAATGCCACTTATACTTGGTAGCTCTGACAACATAGCTGAGAGGAAAAAGGAGACGTCTGTTGTATTATTGCCACTCTCTAGCGATCAAGTGCTGAAGATAAAGAATAGGGCCAATGAAGAGACTGCGGTGTCTTCTTTAGTTCGTGCCACTCGTCCCTATAGTAGATATGAAGCGATTACTGCTCATATTTGGACAAGCGGTAGTAAAGCTCGTAGTCATGATAAGCAACAGCCAACCACAGTTCGATTTGTTGGTTATGCTGCCCAGAAAGTACGAGAAGGAATTGACAAGCTTACAGAGGAGTACATGAGGTCTCAGCTAGATTTTCTAGCTAATCAAAAGAATGTTGATTGGATAAGGGGCGGTCTCCACATCGTGGGAGTCTTGAATGGTGTATTTTATGGAAATCCTAATTTTTCTATAGTGAGCTGGTTGAGTATGCCGGTTTATGATGCAGATTTTGGGTGGGGAAAACCACTGTATATGGGTCCAGGAAACTTAAATGAAGATGGCAAGGCACTCATCTTGCCAAGTCCCTCTGGAGATGGCTCTGTTATTATTGCCCTACGTTTTCAAACAGCTCATATGGAAGCTTTCCAGAAGTTCTTCTATGAGGacatatg 1247 0.409 MVTVKCSYTVVPSEPTPKGPLWLSGIDQMAAWTHIPTLYIYKPNQNLDNFVERMRESLSKILVHYYPLAGQLRWIEHSRLELDCNEKGATLLLAESPKTLDEYGNFEPNHSITELFPQVDYSKSIEETHLLLAQLTRFSCGGLSLGLAMTHSLVDGVSAIHFVNSWAKLARGETLKEEELPFLDRTVMRSADPPEAPRFDHKANEFMPMPLILGSSDNIAERKKETSVVLLPLSSDQVLKIKNRANEETAVSSLVRATRPYSRYEAITAHIWTSGSKARSHDKQQPTTVRFVGYAAQKVREGIDKLTEEYMRSQLDFLANQKNVDWIRGGLHIVGVLNGVFYGNPNFSIVSWLSMPVYDADFGWGKPLYMGPGNLNEDGKALILPSPSGDGSVIIALRFQTAHMEAFQKFFYEDI 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01031 415 Pfam Transferase family 1 290 - -
Bva01g01031 415 Pfam Transferase family 294 413 - -
Bva01g01031 415 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 293 415 - -
Bva01g01031 415 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 291 - -
Bva01g01031 415 Gene3D - 214 292 IPR023213 -
Bva01g01031 415 Gene3D - 1 208 IPR023213 -
Bva01g01031 415 Gene3D - 293 414 IPR023213 -
Bva01g01031 415 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 293 415 - -
Bva01g01031 415 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01031 Bva-Chr1 8043781 8044581 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01031 2 413 Monolignol Biosynthesis Gene Families AT5G48930 34.444 2.94e-95 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01031 K13065 - ming:122083628 436.802