Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01030 atggtgaCCGTGAAATGCTCTTATATTGTAGTTCCCAGTGAGCCTACTCCAAAGGGTCCTTTCTGGTTGTCCGAcgtcgaccaaatggctgctTGGACTCATGTACCCTCCATTTACATTTACAAGCCAAACCAAATCCTTGATGATTTTGTTGAGAGAATGAGAGAATCTCTCAGCAAAATCTTAGTTCACTACTATCCACTAGCTGGTCAACTTCGGTTGATAGAAGGTGGCAGAGTGGAATTAAACTGCAATGAAAAGGGAGCGACTTTGTTGGTTGCCGAATCTCCAAAAACTTTAGATGAATATGGTAACTTTGAACCCGACCATACCATTACTGAGCTCTTTCCCCATGTTGATTACAGCAAATCTATTGAGGAGACTCACTTGTTCCTGGCGCAATTGACAAGATTCAGTTGTGGTGGCCTTTCTCTTGGGCTTGCCATTTCCCATACTTTGGCTGATGGGGTTTCTGCTATTCAGTTTGTCAACTCATGGGCCAAGCTGGCTCGTGGAGAAACattgaaggaagaagaattgCCTTTCTTGGATCGAACCATTATGAGAAGTTCAGATCCAACTGCAGCACCGCGTTTTGATCACAAAGCCTATGAGTTTATGTCAATGCCACTTATACTTGGTAGCTCTGACAGCATAGCTGAGAGGAAAAAGGAGACTTGTGTTGCATTATTGCCGCTCACAAGAGATCAAGTGCTGAAGATAAAGAATAAGGCCAATGAAGAGACTGCGGTGTCTTCTTTAGTTCGTGCCGCTCGTCCTTATGGTAGATATGAAGCGATTACTGCTCATATTTGGACAAGCGGTAGTAAAGCTCGTAATCATGATAAGCAACAGCCAACAATAGTTCGATTTGTTGGTGATACTCGCAATAGATTGAAGCCATCCCTtcctagaaatttttttggtaatgcTTTGGCACGAACATTAACACCTATTTGCTCCTCCGGTGAAATCATATCAAACCCTTTAGGCTATGCTGCCCAGAAAGTACAAGAAGGCATTGACAAGCTTACAGAGGAGTACACGAGGTCTCAGCTAGATTTTCTAGCTAGTCAAGAGAATATTGATTGGGTAAGGGGCAGTCTCCACTTCGTGGGAGTCTTGACaggtttattttttggaaatcCTAATTTTTCTATAGTGAGCTGGTTGAGTATGCCGGTTTATGATGCAGATTTTGGGTGGGGAAAACCACTGTATATGGGTCCAGGAGATTTAAATGAAGATGGCAAGGTACTCATCTTGCCAAGTCCCTCTGGAGATGGCTCTGTTATTATTGCCCTACGTTTACAAACAGCTCATATGGAAGCTTTCAAAAAGTTCTTCTACGAGGACATATG 1361 0.4056 MVTVKCSYIVVPSEPTPKGPFWLSDVDQMAAWTHVPSIYIYKPNQILDDFVERMRESLSKILVHYYPLAGQLRLIEGGRVELNCNEKGATLLVAESPKTLDEYGNFEPDHTITELFPHVDYSKSIEETHLFLAQLTRFSCGGLSLGLAISHTLADGVSAIQFVNSWAKLARGETLKEEELPFLDRTIMRSSDPTAAPRFDHKAYEFMSMPLILGSSDSIAERKKETCVALLPLTRDQVLKIKNKANEETAVSSLVRAARPYGRYEAITAHIWTSGSKARNHDKQQPTIVRFVGDTRNRLKPSLPRNFFGNALARTLTPICSSGEIISNPLGYAAQKVQEGIDKLTEEYTRSQLDFLASQENIDWVRGSLHFVGVLTGLFFGNPNFSIVSWLSMPVYDADFGWGKPLYMGPGDLNEDGKVLILPSPSGDGSVIIALRLQTAHMEAFKKFFYEDI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01030 453 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 453 - -
Bva01g01030 453 Pfam Transferase family 1 451 - -
Bva01g01030 453 Gene3D - 1 206 IPR023213 -
Bva01g01030 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 453 - -
Bva01g01030 453 Gene3D - 215 452 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01030 Bva-Chr1 8038717 8040710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01030 2 451 Monolignol Biosynthesis Gene Families AT5G48930 38.411 1.19e-110 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01030 K13065 - ming:122083628 494.197