Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01028 atggtgaCCGTGAAATGCTCTTATACTGTAGTTCCCAGTGAGCCTACTCCAAAGGGTCCTTTCTGGTTGTCCGACGTCGACCAAATGGCTACTTGGACTCATGTACCCTCCATTTACATTTACAAGCCAAACCAAATCCTTGATGATTTTGTTGAGAGAATGAGAGAATCTCTCAGCAAAATCTTAGTTCACTACTTTCCACTAGCTGGTCAACTTCGGTTGATAGAACGTGGCAGAGTGGAATTAAACTGCAATGAAAAGGGAGCGACTTTGTTGGTTGCTGAATCTCCAAAAACTTTAGATGAATATGGTAATTTTGAACCAGACCATACCATTACTGAGCTCTTTCCCCATGTTGATTACACCAAATCTATTGAGGAGACTCACTTGTTCCTGGCGCAATTGACAAGATTCAGTTGTGGTGGCCTTTCTCTTGGGCTTGCCATTTCCCATACTTTGGCTGATGGGGTTTCTGCTATTCAGTTTGTCAACTCATGGGCCAAGCTAGCTCGTGGGGAAACattgaaggaagaagaattgCCTTTCTTGGATCGAACCATCATGAGAAGTTCAGATCCACCTGCAGCACCGCGTTTTGATCACAAAGCCTATGAGTTTATGTCGATGCCACTTATACTTGGTAGCTCTGACAGCATAGCTGAGAGGAAAAAGGAGTCTTGTGTTGCATTATTGCCGCTCACAAGAGATCAAATGCTGAAGATAAAGAATAAGGCCAATGAAGAGACTGCGGTGTCTTCTTTAGTTCGTGCCGCTCGTCCTTATAGTAGATATGAAGCCATTACTGCTCATATTTGGAGAAGCGGTAGTAAAGCTCGTAATCATGATAAGCAACAGCCAACAATAGTTCGATTTGTTGGTGATACTCGCAATAGATTGAAGCCATCCCTtcctagaaatttttttggtaatgcTCTGGCACGAACATTAACACCTATTTGCTCCTCTGGTGAAATCATATCAAACCCTTTAGGTTATGCTGCCCGGAAAGTACAAGAAGGAATTGACAAGCTTACAGAGGAGTACATGAGGTCTCAGCTAGATTTTCTAGCTAGTCAAGAGAATATTGATTGGGTAAGGGGCAGTCTCCACTTCGTGGGAGTCTTGAAaggtttattttttggaaatcCTAATTTTTCTATAGTGAGCTGGTTGAGTATGCCGGTTTATGATGCCGATTTTGGGTGGGGAAAACCACTGTATATGGGTCCAGGAGATTTAAATGAAGATGGCAAGGTACTCATCTTGCCAAGTCCCTCTGGAGATGGCTCTGTTATTATTGCCCTACGTTTACGAACAGCTCATATGGAAGCATTCCAAAAGTTCTTCTACGAGGacatatg 1361 0.4107 MVTVKCSYTVVPSEPTPKGPFWLSDVDQMATWTHVPSIYIYKPNQILDDFVERMRESLSKILVHYFPLAGQLRLIERGRVELNCNEKGATLLVAESPKTLDEYGNFEPDHTITELFPHVDYTKSIEETHLFLAQLTRFSCGGLSLGLAISHTLADGVSAIQFVNSWAKLARGETLKEEELPFLDRTIMRSSDPPAAPRFDHKAYEFMSMPLILGSSDSIAERKKESCVALLPLTRDQMLKIKNKANEETAVSSLVRAARPYSRYEAITAHIWRSGSKARNHDKQQPTIVRFVGDTRNRLKPSLPRNFFGNALARTLTPICSSGEIISNPLGYAARKVQEGIDKLTEEYMRSQLDFLASQENIDWVRGSLHFVGVLKGLFFGNPNFSIVSWLSMPVYDADFGWGKPLYMGPGDLNEDGKVLILPSPSGDGSVIIALRLRTAHMEAFQKFFYEDI 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01028 453 Gene3D - 215 452 IPR023213 -
Bva01g01028 453 Gene3D - 1 206 IPR023213 -
Bva01g01028 453 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 453 - -
Bva01g01028 453 Pfam Transferase family 1 451 - -
Bva01g01028 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01028 Bva-Chr1 8009143 8010755 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01028 2 451 Monolignol Biosynthesis Gene Families AT5G48930 38.190 8.71e-112 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01028 K13065 - ming:122083628 495.738