Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01021 ATGGATCAGaaaggctctgataccatgtcaGAAAGACTAGTATCAGATACTAACAGAAACTTATCCCTTAACAATGAAGCGATTACTGTTCAAATTTGGAGAAGCGGCAGTAAAGCTCGTAATCATGATAAGCAACAGCCAACAATAGTTCGATTTGTTGGTGATACTCGCAATAGATTGAAGCCATCCCTTCCtcgaaatttttttggtaatgcTTTGGCACGAACATTAACACCTATTTGCTCCTCTGGTGAAATCACATCAAACCCTTTAGGTTATGCTGCCCAGAAAGTACAAGAAGGAATTGACAAGCTTACAGAGGAGTACGTGAGGTCTCAGCTAGATTTTCTAGCTAGTCAAGAGAATATTGATTGGGTAAGGGGCAGTCTCCACTTCGTGAGAGTCTTGACaggtttattttttggaaatcCTAATTTTTCTATAGTGAGCTGGTTGAGTATGCCGGTTTATGATGCAGATTTTGGGTGGGGAAAACCACTGTATATGGGTCCAGGAGATTTAAATGAAGATGGCAAGGTACTCATCTTGCCAAGTCCCTCTGGAGATGGCTCTGCTATTATTGCCTTACGTTTACAAACGGCTCATATGGATGCTTTCCAAAAGTTCTTCTACGAGGacatatg 644 0.3758 MDQKGSDTMSERLVSDTNRNLSLNNEAITVQIWRSGSKARNHDKQQPTIVRFVGDTRNRLKPSLPRNFFGNALARTLTPICSSGEITSNPLGYAAQKVQEGIDKLTEEYVRSQLDFLASQENIDWVRGSLHFVRVLTGLFFGNPNFSIVSWLSMPVYDADFGWGKPLYMGPGDLNEDGKVLILPSPSGDGSAIIALRLQTAHMDAFQKFFYEDI 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01021 214 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 19 214 - -
Bva01g01021 214 Gene3D - 6 213 IPR023213 -
Bva01g01021 214 Pfam Transferase family 23 212 - -
Bva01g01021 214 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01021 Bva-Chr1 7944308 7945129 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01021 26 212 Monolignol Biosynthesis Gene Families AT5G48930 38.503 9.07e-45 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01021 K13065 - ming:122083628 227.254