Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01020 atggtgaCCGTGAAATGCTCTTATACTGTAGTTCCCAGTGAGCCTACTCCAAAGGGTCCTTTCTGGTTGTCCGAcgtcgaccaaatggctgctTGGACTCATTTTGTCAACTCATGGGCCAAGCTAGCTCGTGGGGAAACATTGAAGGTAGAAGAATTGCCTTTCTTGGATCGAACCATTATGAGAAGTTCAGATCCACCTGCAGCACCGCGTTTTGATCACAAAGCCTATGAGTTTATGTCAATGCCACTTATACTGGGTAGCTCTGACAGCATAGGTGAGAGGAAAAAGGAGACTTGTGTTGCATTTTTGCCGCTCACAAGAGATCAAGTGCTGAAGATAAAGAATAAGGCCAATGAAGAGACTGCGGTGTCTTCTTTAGTTCGTGCCACTCGTCCTTATAGTAGATATGAATGTCAAAAAGAATGGTATCAGATGta 440 0.4136 MVTVKCSYTVVPSEPTPKGPFWLSDVDQMAAWTHFVNSWAKLARGETLKVEELPFLDRTIMRSSDPPAAPRFDHKAYEFMSMPLILGSSDSIGERKKETCVAFLPLTRDQVLKIKNKANEETAVSSLVRATRPYSRYECQKEWYQM 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01020 146 Gene3D - 29 79 IPR023213 -
Bva01g01020 146 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 31 123 - -
Bva01g01020 146 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 34 - -
Bva01g01020 146 Pfam Transferase family 32 125 - -
Bva01g01020 146 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 4 34 - -
Bva01g01020 146 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 31 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01020 Bva-Chr1 7939207 7940027 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01020 34 138 Monolignol Biosynthesis Gene Families AT5G48930 37.037 2.06e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01020 K13065 - ming:122083628 110.538