Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01016 ATGCCAATGCCACTTATACTTGGTAGCTCTGACAACATAGCTGAGAGGAAAAAGGAGACTTGTGTTGCATTATTGCCACTCTCTAGCGATCAAGTGCTCAAGATAAAGAATAAGGCCAATGAAGAGACTGCGGTGTCTTCTTTAGTTCGTGCCACTCGTCCCTATAGTAGATATGAAGCGATTACTGCTCATATTTGGAGAAGCGGTAATAAAGCTCGTAATCATGATAAGCAACAGCCAACAATAGTTCGATTTCTTGGTGATACTCGCAATCGATTGAAGCCACCCCTTCCTCgaaattattttggtaatgCTGTGGCACGAATGTTAACACCTATGTGCTCCTCTGGTGAAATCATATCAAACCCTTTAGGTTATGCTCCCAGAAAGTACAAAAAGGAATTGACACGCTTACAGAGGAGTACACGAGATTTTGGGTGGGGAAAACCACTGTATATGGGTCCAGGAATCTTAAATGAAGATGGCAAGACATTCATCTTGCCAAGTCCTTCTGAAGATGGCTCTGTTATTATTGCCCTACGTTTTCAAACAGCTCATATGGAAGCTTTCCAGAAGTTCTTCTATGAGGacatatg 596 0.4094 MPMPLILGSSDNIAERKKETCVALLPLSSDQVLKIKNKANEETAVSSLVRATRPYSRYEAITAHIWRSGNKARNHDKQQPTIVRFLGDTRNRLKPPLPRNYFGNAVARMLTPMCSSGEIISNPLGYAPRKYKKELTRLQRSTRDFGWGKPLYMGPGILNEDGKTFILPSPSEDGSVIIALRFQTAHMEAFQKFFYEDI 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01016 198 Pfam Transferase family 143 196 - -
Bva01g01016 198 Pfam Transferase family 9 138 - -
Bva01g01016 198 Gene3D - 139 198 IPR023213 -
Bva01g01016 198 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 9 132 - -
Bva01g01016 198 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 142 198 - -
Bva01g01016 198 Gene3D - 9 138 IPR023213 -
Bva01g01016 198 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 142 198 - -
Bva01g01016 198 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01016 Bva-Chr1 7918870 7919610 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01016 18 196 Monolignol Biosynthesis Gene Families AT5G48930 31.364 2.56e-34 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01016 K13065 - vvi:100258760 191.815