Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01005 ATGGCTTCTGATTCCAAAGAGAACAATAATGATCTTGTGAAAACCAtaagtgaagaagaagaagaaaattatgatgGCGCTTGTGCCTTACTCCTAGGGGGCAATCCAATATTCTCTGCAGTTCTGAAGGCTGCCCTCGAGCTCCACTTATTTGAAATCATTGCTAACGAAGCAAGCTCATATGGTGCACCCATGTCTGTCTCTGAAATTGCTTCTCACCTTCCAACCCAACACCCAGAGATGCCTCGAAGGCTCGAGCGCATTGCTGCGTCTGCTGGCCTCTCACTCTCTTCTTGCTTGTTCATCGCGGACCAATCAAGATGGTGGGCTTG 332 0.4488 MASDSKENNNDLVKTISEEEEENYDGACALLLGGNPIFSAVLKAALELHLFEIIANEASSYGAPMSVSEIASHLPTQHPEMPRRLERIAASAGLSLSSCLFIADQSRWWA 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01005 110 PANTHER O-METHYLTRANSFERASE 1 98 IPR016461 GO:0008168
Bva01g01005 110 Gene3D - 3 96 IPR036388 -
Bva01g01005 110 MobiDBLite consensus disorder prediction 1 20 - -
Bva01g01005 110 SUPERFAMILY "Winged helix" DNA-binding domain 27 88 IPR036390 -
Bva01g01005 110 Pfam Dimerisation domain 41 88 IPR012967 GO:0046983
Bva01g01005 110 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 98 - -
Bva01g01005 110 Coils Coil 2 22 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01005 Bva-Chr1 7821253 7821585 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01005 29 88 Monolignol Biosynthesis Gene Families AT5G54160 48.333 3.01e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01005 K13066 - gmx:100802593 70.4774