Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01004 ATGTTTACGAGTGTTCCAAGCGGTGATGCCATGATGTTAAAGGCTATAACCCATACTTGGTCAGATGAAACTTGTGTTGCGATTCTGAGAAACTGCAACAAGGCATTGACTGAGAAGGGGAAAGTTATTATTGTGGATGTCATAATGCCAGAAACAATTGAACCAACAGTGAAGGCACAGTTAACTTCTCGTTTTGACAACATGATGTTCTTATATGCTGGAGGAAGGGAGCGAACTGAGAAAGAATTTGAGGCTTTGTGCAAACAATCTGGCTTTTCAGGATTTCAGGTTGTTTGTCGTGCACACTCTGTTTTGGGGGTGATAGAATTCCATAAAGGGTA 341 0.4135 MFTSVPSGDAMMLKAITHTWSDETCVAILRNCNKALTEKGKVIIVDVIMPETIEPTVKAQLTSRFDNMMFLYAGGRERTEKEFEALCKQSGFSGFQVVCRAHSVLGVIEFHKG 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01004 113 PANTHER O-METHYLTRANSFERASE 1 112 IPR016461 GO:0008168
Bva01g01004 113 Pfam O-methyltransferase domain 1 93 IPR001077 GO:0008171
Bva01g01004 113 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 112 IPR016461 GO:0008168
Bva01g01004 113 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 112 - -
Bva01g01004 113 Gene3D Vaccinia Virus protein VP39 2 101 IPR029063 -
Bva01g01004 113 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 110 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01004 Bva-Chr1 7817364 7818627 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01004 1 112 Monolignol Biosynthesis Gene Families AT5G54160 50.442 9.17e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01004 - - gmx:100798347 151.754