Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g01001 ATGGATTCTGATTCCAAAGAGAACAACAATCATCTTGTGAAAAGCCcaagtgaagaagaagaagaagattatGATGGCGCTTGTGCCTTACTCCTAGGCTGCAGTCCAATATTCTCTGCAGTTCTGAAGGCTGCCCTCGAGCTCCACTTATTTGAAATCATTGCTAACGAAGCAAGCTCATATGGTGCACCCATGTCTGTCTCTGAAATTGCTTCTCATCTTCCAACCCAACACCCAGAGATGCCTCGAAGGCTCGAGCGCATGCTGCATCTGCTGGCCTCTCACTCTCTTCTTGCTTGTTCTTCGCGGACCAATCAAGATGGTGGGATTGAGAGAGTTTATGGACTCACACCTGTTGCTCAGTACTTTGCACATGATATCAGTGCTGAGTTGTTTCGTTCATTGTCAAAATTTCTAAGTCATCAAGCAATTACAGAGGTCTTAGCGATAGAGCATGTTGGAGGAGATATGTTTACGAGTGTTCCAAGCGGTGATGCCATGATGTTAAAGGCTATAACCCATAATTGGTCAGATGAAACTTGTGTTGCGATTCTGAGAAACTGCGACAAGGCATTGACTGAGATGGGGAAAGTGATTATTGCGGATGTCATAATGCCAGAAACAATTGAACCAACAGTGAAGGCACAGTTAACTTGTCGTCTTGACAACATGATGTTCTTATATGCTGGAGGAAGGGAAAGAACTGAGAAAGAATTTGAGGCTTTGTGCAAACAATCTGGCTTTTCAGGATTTCAGGTTGTTTGTCGTGCACACTCTGCTTTGGGGGTGATAGAATTCCATAAAGGgta 809 0.4277 MGKVIIADVIMPETIEPTVKAQLTCRLDNMMFLYAGGRERTEKEFEALCKQSGFSGFQVVCRAHSALGVIEFHKG 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g01001 75 Pfam O-methyltransferase domain 2 55 IPR001077 GO:0008171
Bva01g01001 75 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 71 IPR029063 -
Bva01g01001 75 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 74 IPR016461 GO:0008168
Bva01g01001 75 PANTHER O-METHYLTRANSFERASE 2 74 IPR016461 GO:0008168
Bva01g01001 75 Gene3D Vaccinia Virus protein VP39 2 63 IPR029063 -
Bva01g01001 75 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 2 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g01001 Bva-Chr1 7801020 7803863 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g01001 2 63 Monolignol Biosynthesis Gene Families AT5G54160 50.794 2.38e-15 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g01001 - - gmx:100798347 98.9821