Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00999 ATGGCTTCTGATTCCAAAGAGAACAACAATCATCTTGTGAAAAGCccaattgaagaagaagaagaagattatGATGGCGCGTGTGCCTTACTCCTAGGCTGCAGTCCAATATTCTCTGCAGTTCTGAAGGCTGCCCTCGAGCTCCACTTATTTGAAATCATTGCTAACGAAGCAAGCTCAGATGGTGCACCCATGTCTGTCTCTGAAATTGCTTCTCATCTTCCAACCCAACACCCAGAGATGCCTCGAAGGCTTGAGCGCATGCTTATTCTGCTGGCCTCTCACTCTCTTCTTGCTTGTTCATCGCGGACCAATCAAGATGGTGGGATTGAGAGAGTTTATGGACTCACACCTGTTGCTCAATACTTTGCACATGATATCAGTGCTGAGTCGTTTCGTTCATTGTCAAAATTTCTAAGTCATCAAGCAATTACAGAGGTCTTgATTAATTTCAAGGATGCCATTCTTGATTCCGAAGCTGACCTATTCAAGAAAATTCATGGGAAGACTGCGTACGAATACATGGCCACTGATCCAACACTGAGTGAAGCTTTTCAAGGAGTCATGACCAAGTTTTGCTTAATAGACACAATAAGTCTACTTGAAGTGTACAATGGATTTGAGGGAATTTCAACACTGGTTGATGTAGGAGGAGGCACAGGccaaaatttacaaatgatAATAGCCGAGTATCCTTCAATAAAGGGTATTAATTTTGATCAGCCACAAGTGATAAAAAATGCACCAAAACTTTCAGGGATAGAGCATGTTGGAGGAGATATGTTTACGAGTGTTCCAAGTGGTGATGCCATGATGTTAAAGCTTGTAACCCATAATTGGTCAGATGAAACTTGTGTTACGATTCTGAGAAACTGCAACAAGGCATTGACTGAGAAGGGGAAAGTGATTATTGTAGATTTCATAATGCCAGATACAATCGAACCAACAGTGAAGACACAGTTAACTTCTTGTCTTGACAACATGATGTTCTTATATGCTGGAGGAAGAGAGCGAACTGAGAAAGAATTTGAGGCTTTGTGCAAACAATCTGGCTTTTCAGGATTTCAGGTTGTTTGTCGTGCACGCTCTGCTTTGGGGGTGATAGAATTCCATAAAGGGTA 1121 0.4059 MASDSKENNNHLVKSPIEEEEEDYDGACALLLGCSPIFSAVLKAALELHLFEIIANEASSDGAPMSVSEIASHLPTQHPEMPRRLERMLILLASHSLLACSSRTNQDGGIERVYGLTPVAQYFAHDISAESFRSLSKFLSHQAITEVLINFKDAILDSEADLFKKIHGKTAYEYMATDPTLSEAFQGVMTKFCLIDTISLLEVYNGFEGISTLVDVGGGTGQNLQMIIAEYPSIKGINFDQPQVIKNAPKLSGIEHVGGDMFTSVPSGDAMMLKLVTHNWSDETCVTILRNCNKALTEKGKVIIVDFIMPDTIEPTVKTQLTSCLDNMMFLYAGGRERTEKEFEALCKQSGFSGFQVVCRARSALGVIEFHKG 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00999 373 Pfam Dimerisation domain 41 93 IPR012967 GO:0046983
Bva01g00999 373 SUPERFAMILY "Winged helix" DNA-binding domain 26 126 IPR036390 -
Bva01g00999 373 CDD AdoMet_MTases 212 309 - -
Bva01g00999 373 PIRSF O-mtase 5 372 IPR016461 GO:0008168
Bva01g00999 373 PANTHER O-METHYLTRANSFERASE 1 372 IPR016461 GO:0008168
Bva01g00999 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 136 361 IPR029063 -
Bva01g00999 373 Gene3D Vaccinia Virus protein VP39 125 372 IPR029063 -
Bva01g00999 373 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 372 - -
Bva01g00999 373 Gene3D - 4 123 IPR036388 -
Bva01g00999 373 Pfam O-methyltransferase domain 151 353 IPR001077 GO:0008171
Bva01g00999 373 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 372 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00999 Bva-Chr1 7784421 7789191 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00999 29 361 Monolignol Biosynthesis Gene Families AT5G54160 47.305 2.22e-106 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00999 - - gmx:100798347 407.142