Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00997 ATGGCTTCTGATTCCAAAGAGAACAACAATCATCTTGTGAAAACCCcaagtgaagaagaagaagaagattatGATGGCGCTTGTGCCTTACTCCTAGGGTGCAATCCAATATTCTCTGCCGTTCTGAAGGCTGCCCTCGAGCTCCACTTATTTGAAATCATTGCTAACGAAGCAAGCTCATATGGTGCACCCATGTCTGTCTCTGAAATTGCTTCTCACCTTCCAACCCAACACCCAGAGATGCCTCGAAGGCTCGAGCGCATGCTGCATCTGCTGGCCTCTCACTCTCTTCTTGCTTGTTCATCGCGGACCAATCAAGATGGTGGGCTTGAGAGAGTTTATGGACTCACACCTGTTGCTCAGTACTTTGCACATGATATTAGTGCTGAGTTGTTTCGTTCATTGTCAAAATTTCTAAGTCATCAAGCAATTACAGAGGTCTTgatTAATTTCAAGGATGCCATTCTTGATTCCGAAGCTGACCTATTCAAGAAAATTCATGGGAAGACTGCGTACGAATACATGGCCACTGATCCAACACTGAATGAAGCTTTTCAAGCAGTCATGACCAAGTTTTGCTTGATAGACACATTGGGTGTACTTGAAGTGTACAACGGATTTGAGGGAATTTCAACACTGGTTGATGTAGGAGGAGGTTCAGGccaaaatttacaaatgatAATAGCCGAGTATCCTTCAATAAAGGGCATTAATTTTGATCTGCCACAAGTGATAAAAAATGCACCAAAACTTTCAGGGATAGAGCATGTTGGAGGAGATATGTTTACGAGTGTTCCAAGTGGTGATGCCATGATGTTAAAGGCTATAACCCATAATTGGTCAGATGAAACTTGTGTTACGATTCTGAGAAACTGCAACAAGGCATTGACTGAGAAGGGGAAAGTGATTATTGTGGATGTCATAATGCCAGAAACAATTGAACCAACAGTAAAGGCACAGTTAACTTGTCGTCTTGACAACATGATGTTCTTATATGCTGGAGGAAGGGAAAGAACTGAGAAAGAATTTGAGGCTTTGTGCAAACAATCTGGCTTTTCAGGATTTCAGGTTGTTTGTCGTGCACATTCTGCTTTGGGGGTGATAGAATTCCATAAAGGGTA 1121 0.4103 MASDSKENNNHLVKTPSEEEEEDYDGACALLLGCNPIFSAVLKAALELHLFEIIANEASSYGAPMSVSEIASHLPTQHPEMPRRLERMLHLLASHSLLACSSRTNQDGGLERVYGLTPVAQYFAHDISAELFRSLSKFLSHQAITEVLINFKDAILDSEADLFKKIHGKTAYEYMATDPTLNEAFQAVMTKFCLIDTLGVLEVYNGFEGISTLVDVGGGSGQNLQMIIAEYPSIKGINFDLPQVIKNAPKLSGIEHVGGDMFTSVPSGDAMMLKAITHNWSDETCVTILRNCNKALTEKGKVIIVDVIMPETIEPTVKAQLTCRLDNMMFLYAGGRERTEKEFEALCKQSGFSGFQVVCRAHSALGVIEFHKG 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00997 373 PANTHER O-METHYLTRANSFERASE 7 372 IPR016461 GO:0008168
Bva01g00997 373 Pfam O-methyltransferase domain 151 353 IPR001077 GO:0008171
Bva01g00997 373 CDD AdoMet_MTases 212 309 - -
Bva01g00997 373 PIRSF O-mtase 5 372 IPR016461 GO:0008168
Bva01g00997 373 Pfam Dimerisation domain 41 93 IPR012967 GO:0046983
Bva01g00997 373 SUPERFAMILY "Winged helix" DNA-binding domain 26 126 IPR036390 -
Bva01g00997 373 Gene3D - 4 123 IPR036388 -
Bva01g00997 373 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 140 368 IPR029063 -
Bva01g00997 373 Gene3D Vaccinia Virus protein VP39 127 372 IPR029063 -
Bva01g00997 373 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 372 IPR016461 GO:0008168
Bva01g00997 373 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 7 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00997 Bva-Chr1 7754300 7758745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00997 29 372 Monolignol Biosynthesis Gene Families AT5G54160 47.246 5.89e-107 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00997 - - gmx:100798347 413.305