Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00996 ATGGGCGCTTCTGCTTCCAAAGAGAATAATCATCTTTTGAAAACCACTTTTAGTGAAGAAGAAGGTAAAGATTATGATGGGGTTTGTGCCTTCCTTCTTGGCTGCACTCATTTGTTCTCTGCAGTTCTGAAAACTGCCCTTGAGCTCCACTTGTTTGAAGTCATAGCTAAAGGGGCAAGCTCGTTTGGTGCATCTATGTCTGCCTCTGAAATTTCTTCACGCTTTCCAAACCAACGCCCAGAGATGCCTCAGAGGCTCGAGTGCATGCTGCGTCTGCTGGCCAGTCACTCTCTTCTTACTTGTTCTACACGCAACAACAAAGATGGTGGGGTTGAGAGAGTTTATGGGATCACACCAGTTGCTCAATACTTTTACATGATGAAAGTGGGTTTATTGACAAAGTTTCTCAACCATCAAGCCATTACAGAGGTCTTGTA 437 0.4439 MGASASKENNHLLKTTFSEEEGKDYDGVCAFLLGCTHLFSAVLKTALELHLFEVIAKGASSFGASMSASEISSRFPNQRPEMPQRLECMLRLLASHSLLTCSTRNNKDGGVERVYGITPVAQYFYMMKVGLLTKFLNHQAITEVL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00996 145 Pfam Dimerisation domain 42 94 IPR012967 GO:0046983
Bva01g00996 145 Gene3D - 4 124 IPR036388 -
Bva01g00996 145 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 6 142 - -
Bva01g00996 145 SUPERFAMILY "Winged helix" DNA-binding domain 30 125 IPR036390 -
Bva01g00996 145 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 145 IPR016461 GO:0008168
Bva01g00996 145 PANTHER O-METHYLTRANSFERASE 6 142 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00996 Bva-Chr1 7753133 7753570 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00996 30 124 Monolignol Biosynthesis Gene Families AT5G54160 45.263 4.22e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00996 K13066 - qsu:112031144 105.531