Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00994 ATGGTGGTCGTGATcatgcagcagcagcagcagaatCCCTCTGCACTGGTGTCACAACTCAGCAATCCTCAGCCGTCTTCAGCCACCACCGCAAGCACCCCCACCACCACCAACTCTCTTAGGTCACCCACTACTGCAACCCCTACACAGTCCCAGCTATCTTCTCCTCTCTCCATTGCTCCACTCTCTACTCCGGTTCCCACTCCCCACCGCCAAGTTCTGCAGCCGTCTCTTCCGGCAGACCATGTTATTGGACCCGTGTTACCCATTACGGCTGCGCAGCCTTCTGGTGAGCCTGCTTTAACGGTGACGTGCCCCTTAGCCAGAGTGCGGCTTTCTGATATTGCCCCATATGACGGGGCTCCGGCAACTACTTATTTGAGAGCAGTGGAAGCCTTATCTGGGTCTCTGATGAGGCACAATGCAGCGTTGATAGAATTAGGGAGCGAAGATACTGTTCTCATGCGGTGTGGCTTGGAAGGTGCGAGGTTGTATTTTAGGAGCAGGGCTCATCAAGGAGTTGGCAAGGGAAGCCGTGGGGTTTACATGTACAGGGCCGGAAGGGCTTGGGAAGATTGGGATTCATCTCCTCCTTGCATGGCTGATACTTTTAGGTGCATGGGAAAGGCAGCTCGATCTGCTCTGTGTGCTATTGCAAGGCATCTTCGTCTCCGAAGCGATGTTTTTAACCATTTGCTTGATGATACTCCATTGCCTGCTAATGAGGTGTCCTCCTCAGTTCTTGTAGCAACCTACTCAAGTGCTTCTTTGCAAATTGGCAAAGGAGCTATTGGAGGTGGTAAGGCAACCTTGAATGGTGAAGTTGAGAAGGGATTATTGACATTGGTATCTTCAGATGCTCCTGGTCTTCAGGTATGTGACCCTAATGGCCGCTGGTTCCTGGCAGATTGTGGTTCAGGTCCTGGGGATCTTTTATTGCTAACAGGCAAGGCGCTTAGCCATGCTACTGCAGGTCTTCGTCCTGCAGCATCATATAGAGCTTCTCCTGATTATCTTCAGGGCACTAATGGTGGGGGAAGGACATCACTTGCATTTAGACTCATGCCTCAGGGCAATGCTATATTAGATTGTTCTCCAATTGCAGCAGCTGGCCATGTCATTCCCCAAAGCTATGTTCCAATATCTGTAAGCCAGTTTATGGATGACCTTTCTGCTGAAGAAGCAGTAGTCAGCCAATCtgataatatttatGTTGCTAGAAACAATTTGAATAAGGAACCATCATTGAGAAGTGTCTTGTCAGATCCTTTATCTGGCTCATTCCTTGAAGATGCCATGGTTGTCTCATGTGGACATTCATTTGGTGGTCTCATGCTGCGGAGAGTCATTGAAACATCAAGATGTACTCTCTGCAATGTAGATATTGAGACTGGTTCTTTGATCCCTAATCTTGCTCTGAGAGCTGCAGCTGCAGCTGTCAAGCATGAGGATGATCGAAGATTATTTCATAATGCTGCCCTCAGAAAGCGGCGGAAAGAAATGGGAGACCAAATGGATCCCACAAGAAGAGCAAACAGGGAAAATGGAGATGTCACAGTGGAAGATGGACTCCACCGCGGAGTACAATATCCATTTTCAGTAAATGAGAAAGTAGTTATTAAGGGTAACAGGAGAACGCCAGAAAAATTTGTTGGTAAAGAAGCTGTCATTACATCTCAATGTCTCAATGGCTGGTACTTGCTCAAGATTATTGGAACTGGAGAGAATGTCCGTCTACAATACAGGTCTCTTCGAAAGCTCTTGAATTCACCAGTCATAGATAACCAGTGTCCCTCACAGGCAATTCAAAATAGCAGATCTTA 1823 0.4696 MVVVIMQQQQQNPSALVSQLSNPQPSSATTASTPTTTNSLRSPTTATPTQSQLSSPLSIAPLSTPVPTPHRQVLQPSLPADHVIGPVLPITAAQPSGEPALTVTCPLARVRLSDIAPYDGAPATTYLRAVEALSGSLMRHNAALIELGSEDTVLMRCGLEGARLYFRSRAHQGVGKGSRGVYMYRAGRAWEDWDSSPPCMADTFRCMGKAARSALCAIARHLRLRSDVFNHLLDDTPLPANEVSSSVLVATYSSASLQIGKGAIGGGKATLNGEVEKGLLTLVSSDAPGLQVCDPNGRWFLADCGSGPGDLLLLTGKALSHATAGLRPAASYRASPDYLQGTNGGGRTSLAFRLMPQGNAILDCSPIAAAGHVIPQSYVPISVSQFMDDLSAEEAVVSQSDNIYVARNNLNKEPSLRSVLSDPLSGSFLEDAMVVSCGHSFGGLMLRRVIETSRCTLCNVDIETGSLIPNLALRAAAAAVKHEDDRRLFHNAALRKRRKEMGDQMDPTRRANRENGDVTVEDGLHRGVQYPFSVNEKVVIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKLLNSPVIDNQCPSQAIQNSRS 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00994 607 MobiDBLite consensus disorder prediction 11 61 - -
Bva01g00994 607 Gene3D - 170 396 IPR027443 -
Bva01g00994 607 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 94 605 - -
Bva01g00994 607 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 414 484 IPR013083 -
Bva01g00994 607 SUPERFAMILY Clavaminate synthase-like 178 387 - -
Bva01g00994 607 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 94 605 - -
Bva01g00994 607 SUPERFAMILY RING/U-box 416 482 - -
Bva01g00994 607 MobiDBLite consensus disorder prediction 11 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00994 Bva-Chr1 7727220 7736228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00994 416 591 Plant U-box Gene Family AT5G05230 43.258 8.06e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00994 - - adu:107477161 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00994 01 7727220 7736228 Bva01g00994 01 7727220 7736228 ECH