Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00981 ATGAAGTTTAAGGACTCTAAACGCAGCGTTCATCTCTTCGTCCaatctatcatttttcttccaatttttcCCATTCGAGAACCCTACCTAAGTCACTccctctcctcctcctccaccgAGCAAACCCCAAGACAACTGACGACAGCGGCAGCTCCGCCTGGAACGACCCCATCGCGCCACCACAGTGACCTGCCGAACTCCGTATTTCGTTTTCGCAACCGCAATTCACTGGTTCAGGTACCCTGGAAAATTATCTGGCAGAAATCTGTTGTTTGCATCATGGACATTGATCTTAGGCTACCTTCTGGTGAGCGTGATAAGGAGGATGAAGAACCAAATGCAATCGATAACTTACTGGATGGTGATGAAAAATTGCATAATGGAGATATAGTGGGTGGTAGTATGGTTGATACTGGTATTGAGGTACATGCTACGGATGGTGGAGATTTGAATTCACCTACAGTAGATTTGGTAATATTTAAAGAAGATTCTAATCTTGAGCCACTCTCTGGCATGGAATTTGAGTCGCATGGGGAAGCTTATTCTTTCTACCAAGAATATGCTCGGTCTATGGGATTCAACACTGCAATTCAAAATAGTCGCCGATCAAAAACATCAAGAGAATTTATAGATGCCAAATTTGCTTGTTCTAGATATGGAACAAAACGAGAGTATGACAAGTCATTCAATCGGCCTCGTGCAAGACAGAGCAAGCAAGATTCTGAAAATTCAACTGGTCGGAGATCTTGTTCAAAGACAGAATGTAAAGCAAGCATGCATGTAAAAAGAAGGCCAGATGGGAAATGGGTTATACATAGTTTTGTGAAGGAGCATAATCATGAACTTCTACCAGCCCAAGCTATCAGtgaacaaacaagaaaaatgtatGCTGCAATGGCTAGACAGTTTGCTGAGTACAAGAACGTGGTTGGTCTCAAGAATGagaaaagtccttttgataaAGGTCGTAATCTGGGCCTGGAGTCAGGGGATGCCAAACTtatgcttgaattttttatacagATGCAAAATATGAATTCTAACTTCTTTTATGCAGTAGATATTGGTGATGACCAACGtatgaaaaatcttttatgGATTGATGCAAAAAGTAGGCATGACTATGTCAACTTTAATGATGTTGTGTCTTTTGACACTACCTatgttaaaaacaaatataagatGCCTCTCACACTTTTTGTTGGAGTAAATCAACACTATCAATTTATATTGCTTGGGTGTGCCTTGATATCAGATGAAAGTGCCACAACTTATTCTTGGCTTATGCGGACGTGGCTGAAAGCTGTTGGTGGTCAAGCTCCAAAAGTGATGATTACTGACCATGACAAGACATTGAAGTCAGTTATTTCAGATGTCTTTCCTAATACTCATCATTGTGTTTGCTTATGGCACATATTGGGGAAGGTATCTGAAAATTTGGCTCATGTTATTAAACGACATGAGAATTTTATggcaaaatttgaaaaatgcatCTATAGGTCCTGGACAAGTGATGAGTTTGAGAAGAGGTGGTGGAAAACTGTTGACAGGTTTGAACTCCGAGAGGATGAATGCATGCAATCGTTGTATGAAGATCATAAGTTATGGGTACCAACATTCATGAGGGATGTTTTTTTGGGTGGTATGTCTACCGCCCAACGATCTGAGAGTGTAAATTccttttttgacaaatatgtTCACAAGAAGACCTCTGTGCAAGAGTTCGTCAAACAGTATGAAGGTCTCTTGCAAGAGAGATATGAAGAGGAAGCAAAAGCAGATTCTGATACTTGGAATAGAGTTCCAACATTAAGAACTCCTTCACCTCTGGAGAAGAGTGTTTCAGGGATTTACTCGCATGCTGTATTCAAGAAGATTCAATTGGAGGTTGTGGGTGCTATTGCTTGTGGTCCTAAAGCCGAAAGACATGATGATACAGGCATTACATACAAGGTTCATGATATGGAGAAGAATCAAGATTTCCTAGTTGTATGGAATGACATAAAATCAGAGGTGTCTTGTATATGTCGATTATTTGAATATAGAGGCTATCTTTGTCGACATGCATTAAATGTTCTTCAGTTTGCTCGCCTCTCAGTTATTCCTTCCCAGTATGTTTTGAATCGGTGGACAAAAGATGCAAAGACCAGGCTTATAACAGGAGAGGAATCAGAACACATGCTGGCTAGGGTGCAACGATACAATGACTTATGTCAGCGAGCATTGAAACTGAGTGAAGAGGGGTCTATGTCTCAAGAGAGTTATAGTATTGCATTCCATGCTCTACGTCAAGCATATGAAAACTGTGTGAGTGTTAACAATTGTAGTAAGAGTCCTACAGAAGCTGGCATGTCAGCCGGTCATGGTCAACTTTCTGCTGAAGAAGATACTCAAAGTAGAAATATGGGCAAGACAAGCAAAAAGAAGAGTCCAACTAAAAGGAGGAAGgTGAACTCAGAGGCTAAAGGGGTGACTGTTGGGACACAAGAAAGCTTGCAGCAAATGGACAAATTCAGCGCAAGAGCAGTAACCATTGAAGGTTATTATAATCCCCAGCAGAGTGTACAGGGAATGTTGAACTTAATGGGACCAACACGTGATAGTTACTATGGGAATCAACAGATTTCACCGCTGGGTCAACTAAGTTCAATGGCACCAAGCCATGATAGTTATTATGGTACCCATCAGAGCATGGCTCCTCTGGGAGTGGATTTTTTCCGCACGCCGGGACCAGGTTACACTTATGGGATTCGGGATGACCCTAATGTAAGAGCCTCACAATTGCATGAGGATCCCTCAAGACACGCATG 2810 0.3929 MKFKDSKRSVHLFVQSIIFLPIFPIREPYLSHSLSSSSTEQTPRQLTTAAAPPGTTPSRHHSDLPNSVFRFRNRNSLVQVPWKIIWQKSVVCIMDIDLRLPSGERDKEDEEPNAIDNLLDGDEKLHNGDIVGGSMVDTGIEVHATDGGDLNSPTVDLVIFKEDSNLEPLSGMEFESHGEAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDKSFNRPRARQSKQDSENSTGRRSCSKTECKASMHVKRRPDGKWVIHSFVKEHNHELLPAQAISEQTRKMYAAMARQFAEYKNVVGLKNEKSPFDKGRNLGLESGDAKLMLEFFIQMQNMNSNFFYAVDIGDDQRMKNLLWIDAKSRHDYVNFNDVVSFDTTYVKNKYKMPLTLFVGVNQHYQFILLGCALISDESATTYSWLMRTWLKAVGGQAPKVMITDHDKTLKSVISDVFPNTHHCVCLWHILGKVSENLAHVIKRHENFMAKFEKCIYRSWTSDEFEKRWWKTVDRFELREDECMQSLYEDHKLWVPTFMRDVFLGGMSTAQRSESVNSFFDKYVHKKTSVQEFVKQYEGLLQERYEEEAKADSDTWNRVPTLRTPSPLEKSVSGIYSHAVFKKIQLEVVGAIACGPKAERHDDTGITYKVHDMEKNQDFLVVWNDIKSEVSCICRLFEYRGYLCRHALNVLQFARLSVIPSQYVLNRWTKDAKTRLITGEESEHMLARVQRYNDLCQRALKLSEEGSMSQESYSIAFHALRQAYENCVSVNNCSKSPTEAGMSAGHGQLSAEEDTQSRNMGKTSKKKSPTKRRKVNSEAKGVTVGTQESLQQMDKFSARAVTIEGYYNPQQSVQGMLNLMGPTRDSYYGNQQISPLGQLSSMAPSHDSYYGTHQSMAPLGVDFFRTPGPGYTYGIRDDPNVRASQLHEDPSRHA 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00981 936 MobiDBLite consensus disorder prediction 781 831 - -
Bva01g00981 936 MobiDBLite consensus disorder prediction 781 799 - -
Bva01g00981 936 Pfam SWIM zinc finger 668 693 IPR007527 GO:0008270
Bva01g00981 936 MobiDBLite consensus disorder prediction 225 258 - -
Bva01g00981 936 MobiDBLite consensus disorder prediction 916 936 - -
Bva01g00981 936 Pfam MULE transposase domain 381 473 IPR018289 -
Bva01g00981 936 MobiDBLite consensus disorder prediction 33 65 - -
Bva01g00981 936 Pfam FAR1 DNA-binding domain 182 284 IPR004330 -
Bva01g00981 936 PANTHER FAR-RED ELONGATED HYPOCOTYLS 3-RELATED 142 874 - -
Bva01g00981 936 SMART 26again6 672 699 IPR006564 GO:0008270
Bva01g00981 936 ProSiteProfiles Zinc finger SWIM-type profile. 650 697 IPR007527 GO:0008270
Bva01g00981 936 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 142 874 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00981 Bva-Chr1 7577747 7584994 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva01g00981 FAR1 5e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00981 - - gmx:100817034 1432.16