Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00966 ATGGATGCAGAATCATCGGTTTCTTCAAACAAACTAGAAGATCTTCGCCTATTGGATGATTGTGAGGGAGGTAAGAAGCAAAAAGAGAATGGTGTGTCCAAGGGAAGAGATAGCATAGTGAAGCCTAACCGCCCAATGACGAGGAGCTTCCTTTCCCAATTGCTTaaaaatgctaaaaataaCAAGATGCAGGCTTGTACTGATTTGGTTGGAGGCCCCCCTGTTCTTGATGGGAATGTAGCAGAACCTAAGACACCTTTGCCACAAATAATTCCCCAGAAGAAACTCTCAGTTAAACTAAAGCCTGATGAAGAGGTTACCCAAGACAAgtttaggaaaaagaaagaggaagaagaagggaaCTCTAGGAAGAAATCATATACTCTCACTTCAGTTATCACAGCTCCAAGAAAGGCAGTCTGTGGTCTGACTAACAAACCAAAGGAGCAGATAGTTGACATTGACGCAATTGACACTGGTAATGAGCTTGCTGTTGTGGATTATATTGAAGACATCTACAAGTTCTATAAGCTGAGGGAGAGTTGTCCTCATGATTACATCAACTCACAGCCTGAAATTGATGAAAGTTTGAGAGCTACATTGGTTAATTGGTTGGTAGATGTCCACAGCAAGTTAGGCTTTTCACACGAAACTCTTTATCTGACTATCAGCACTATTGATCGGTTCCTTGCAGTTGAGACTGTGTCAAGGGGGGAACTACGACTGGTTGGCCTCAGTGCCATGCTGATTGCTTCCAAATATGAAGAAGTTGGGGCCCCTGGGGTTGATGAATTCGTGGACATCTCAGATGGACTCTACACTTATGAACAGATAATGGAGGTGGAGAGAACCATATTCCGCAAATTGGGATGGAATTTGGCTGTGCCTACTCCTTATGTTTTCCTTGTTCGTTTTATCAAGGCATCCATTCCTGATGAGAAATTAGAAAACATGGCCCACTTTCTTTCTGAGCTGGGAATGACACGATATGCCACCATAATGTATCGTCCATCAATGCTTGCAGCCTCGGCAGTTCTTACTGCTCGATACACTCTGAATTGGAGCCCAGCTTGGAATGATACACTGAAGCTACACACAGGTTACTCAGAAGAACAACTcatTGATTGTGCTAGATTGATGGTGAGTTTTCACTGCCAGGCTAGGAATGGAAAATCTCCAGATGTGTACACAAAATACTCAGATTTGAAAAAGGGTGCTGTTGCGCTGATGCCACCGGCTACAAATCTCTTGCCTCGTTTGTGTTTATA 1268 0.4188 MDAESSVSSNKLEDLRLLDDCEGGKKQKENGVSKGRDSIVKPNRPMTRSFLSQLLKNAKNNKMQACTDLVGGPPVLDGNVAEPKTPLPQIIPQKKLSVKLKPDEEVTQDKFRKKKEEEEGNSRKKSYTLTSVITAPRKAVCGLTNKPKEQIVDIDAIDTGNELAVVDYIEDIYKFYKLRESCPHDYINSQPEIDESLRATLVNWLVDVHSKLGFSHETLYLTISTIDRFLAVETVSRGELRLVGLSAMLIASKYEEVGAPGVDEFVDISDGLYTYEQIMEVERTIFRKLGWNLAVPTPYVFLVRFIKASIPDEKLENMAHFLSELGMTRYATIMYRPSMLAASAVLTARYTLNWSPAWNDTLKLHTGYSEEQLIDCARLMVSFHCQARNGKSPDVYTKYSDLKKGAVALMPPATNLLPRLCL 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00966 422 MobiDBLite consensus disorder prediction 102 124 - -
Bva01g00966 422 CDD CYCLIN 295 381 IPR013763 -
Bva01g00966 422 Gene3D - 183 294 - -
Bva01g00966 422 PIRSF Cyclin_A_B_D_E 2 421 IPR039361 -
Bva01g00966 422 Gene3D - 171 408 - -
Bva01g00966 422 MobiDBLite consensus disorder prediction 18 35 - -
Bva01g00966 422 SMART Cyclin_C_2 296 413 IPR004367 -
Bva01g00966 422 MobiDBLite consensus disorder prediction 102 125 - -
Bva01g00966 422 Pfam Cyclin, N-terminal domain 171 293 IPR006671 -
Bva01g00966 422 Pfam Cyclin, C-terminal domain 296 412 IPR004367 -
Bva01g00966 422 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 80 416 - -
Bva01g00966 422 SMART cyclin_7 203 287 IPR013763 -
Bva01g00966 422 SMART cyclin_7 300 382 IPR013763 -
Bva01g00966 422 MobiDBLite consensus disorder prediction 18 46 - -
Bva01g00966 422 PANTHER CYCLINS 80 416 IPR039361 -
Bva01g00966 422 CDD CYCLIN 197 285 IPR013763 -
Bva01g00966 422 SUPERFAMILY Cyclin-like 295 413 IPR036915 -
Bva01g00966 422 SUPERFAMILY Cyclin-like 160 293 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00966 Bva-Chr1 7467347 7470044 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00966 131 417 Core Cell Cycle Gene Families AT4G37490 53.220 1.41e-102 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00966 K21777 - gmx:547919 474.167