Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00956 ATGGAGAATCTGCAGAAAAGCTTTCAATCTTCATTCTCAGCCATCTTCTTGATCTTATTATGCCTATGGAGACCCTTGAAAGCCAAGGAACTAATACCCATTGGGGTAATTCTTGATTTGAATTCCCAAATTGGAAGTATGGCTAACAGCTGCATATCCATGGCACTCCATGATTTCTATCAAAAGAATTCTGACTACAAAACCAGACTTGATCTTCGAACCAGGAATTCCAATGACGATATCATCAAAGCAGCATCTGCAGcatttgatttaataaagaaCGAAAAGGTGCATGCAATTATTGGACCACAAAGATCTGGTGAAGCAAGGTTTATAATAGAGATTGGACGCAAAGCTAAAGTAcccattatttccttttcagcTACAAGCCCATCTCTTTCCCCAACTCTAAACTATTTCTTCATTCGTACGGCACAAGATGACTGCTCTCAAGTGAAAGCCATAGCCTCTGTCATAGAAGCTTATGGTTGGCGCGAAGTCATACCAATCTATGAAGACACAGAATATAGCAATGGTCTAATGCCATATCTCAATGAGGCATTGGAAGAAATTGACACAAGAGTGCCTCATAGGGTTGTCATTGATCCTCATTCTAGTGAAACTGAAAGCTTCTATGAGCTTAACAAGCTAAAGAACGAGCTCGGTAAAACATTGCGAACAAGAACATTTGTTGTTCATATGACGCGAGAACAAGGGTCAAAGCTATTTTCATCTGCAGACAAGGCTCAAATGATGAGTGAAGGATATGCATGGATAGTCACTGAAGGACTATCAGCTGTGCTTAGACCTGTGAAGAATCCAATAGTGTTGGACTCAATGCAAGGTGTCTTGGGAGTAAGGCCAATGGTTCCTCAAGGATTTGAGAAGTTCAAAAGAAGATGGAAAGCTTTCACAGGTCAAGAAAGCACTAAATCCCCCTTAACCCTATTTGGATTATGGGCTTATGACACAGTTTGGGCATTAGCCATGGCCGTAGAGAAAGCTGGGATAACAAATTCAGCTTTCCAGAATCAAAACGCCACCAATACTATTAGTTGGTATGACTCAGGTTCAAGGCTTCTAAACCAAATTCTAAGTACTGAATTCCAAGGGATCTCGGGGTATTTCAACCTGTCTGAAGGGCAATTGGTACCatcaaaacttgaaattttcaacttgGTAGGACACAGAGAGAGGATAATTGGATATTGGAACAAAGACAGAGGGCTTTCCAGAGATTTGGTTGCAGATAAGAAATCATTTTCTGAAAGGAAACTGAAGCAACCAATATGGCCAGGTGACACAACTGAGCAGCCAACCAAGTTGAGAATTGGAGTCCCAGTCAAAACAGGCttcaatgaatttatgaaagtGGAAAGGCAATCCTCAAATAATGACATTGTAAAAACTTCTGGGTTTGCCATAGATGTGTTTCTAGAAGTTGTCAAAGTTCTACCCTTTCCTCTTCCTTATGAATTTATCCCTTTCATCAATGAAAGTACTGGAGAGCCTGCCGGGAAAAGCGATGATCTTGTTATGCAAATTACAAAAGACAAGGCAAggctatatttctttttttctatttttattttattggtctTTTCTCTATCAACTTCTTTCACCTTCTA 1628 0.3796 MENLQKSFQSSFSAIFLILLCLWRPLKAKELIPIGVILDLNSQIGSMANSCISMALHDFYQKNSDYKTRLDLRTRNSNDDIIKAASAAFDLIKNEKVHAIIGPQRSGEARFIIEIGRKAKVPIISFSATSPSLSPTLNYFFIRTAQDDCSQVKAIASVIEAYGWREVIPIYEDTEYSNGLMPYLNEALEEIDTRVPHRVVIDPHSSETESFYELNKLKNELGKTLRTRTFVVHMTREQGSKLFSSADKAQMMSEGYAWIVTEGLSAVLRPVKNPIVLDSMQGVLGVRPMVPQGFEKFKRRWKAFTGQESTKSPLTLFGLWAYDTVWALAMAVEKAGITNSAFQNQNATNTISWYDSGSRLLNQILSTEFQGISGYFNLSEGQLVPSKLEIFNLVGHRERIIGYWNKDRGLSRDLVADKKSFSERKLKQPIWPGDTTEQPTKLRIGVPVKTGFNEFMKVERQSSNNDIVKTSGFAIDVFLEVVKVLPFPLPYEFIPFINESTGEPAGKSDDLVMQITKDKARLYFFFSIFILLVFSLSTSFTF 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00956 542 PANTHER OS06G0188250 PROTEIN 23 520 - -
Bva01g00956 542 CDD PBP1_GABAb_receptor_plant 34 414 IPR044440 -
Bva01g00956 542 Gene3D - 147 410 - -
Bva01g00956 542 Gene3D - 436 525 - -
Bva01g00956 542 Gene3D - 54 385 - -
Bva01g00956 542 PANTHER OS06G0188250 PROTEIN 23 520 - -
Bva01g00956 542 SUPERFAMILY Periplasmic binding protein-like I 30 433 IPR028082 -
Bva01g00956 542 Pfam Receptor family ligand binding region 50 394 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00956 Bva-Chr1 7400916 7402631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00956 28 515 Ion Channels AT2G24720 39.216 3.14e-122 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00956 K05387 - jre:109004624 544.273