Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00953 ATGGAGAACCTGCAGAAAAACTTTCAATCCTCATTCTCAGTCATCTTCTTGATCTTATTATGCCTTTGGGTACCCTTGAAAGCCAAGGAACTTATACCCGTAGGGGTAATTCTTGATTTGAATTCCCAAATTGGAAGTATGGCTAACAGCTGCATATCCATGGCACTCCATGATTTCTATCAAAAGAATTCTGACTACAAAACCAGACTTGATCTTCGAACCAGGGATTCCAATAACGATATCATCAAAGCAGCATCTGCAGcatttgatttaataaagaaCGAAAAGGTGCATGCAATTATTGGACCACAAAGATCTGGTGAAGCAAGGTTTATAATGGAGCTTGGACGCAAATTTCAGGTAcccattatttccttttcagcTACAAGCCCATCTCTTTCCCCAACTCTAAACCATTTCTTCATTCGTACGGCACGAGATGACTGCTCTCAAGTGAAAGCCATAGCCTGTGTCATAGAAGCTTATGGTTGGCGCGAAGTCATACCAATCTATGAAGACACAGAATATGGCAATGGTCTAATGCCATATCTCAATGAGGCATTGGAAGAAATTGACACAAGAGTGCCTCGTAGGGTTGTCATTGATCCTCATTCTAGTGAAACTGAAATCTTCAATGAGCTTAACAAGCTAAAGAACGAGCTCGGTAAAAGATTGCGAACAAGAACATTTGTTGTTCATATGACGCGAGAACAAGGGTCAAAGCTATTTTCATCTGCAGACAAGGCTCAAATGATGAGTGAAGGATATGCATGGATAGTCACTGAAGGACTATCAGCTGTTCTTAGACCTGTGAAGAATCCAATAGTGTTGGACTCAATGCAAGGTGTCTTGGGAGTAAGGCCAATGGTTCCTCAAGGATTTGAGAAGTTCAAAAGAAGATGGAAAGTTTTCACAGGTCAAGAAAGCACTAAATCCCCTTTAACCCTATTTGGATTATGGGCTTATGACACAGTTTGGGCATTAGCCATGGCCGTAGAGAAAGCTGGGTTAACAAATTCAGCTTTCCAGAATCAAAACGCCACCAATAATATTAGTTGGTATGACTCAGGGTCCAGCCTTCTAAACCAAATTCTAAGTACTGAATTCCAAGGGATCTCAGGGTATTTCAACCTGTCTAAAGGGCAATTGGTTCCatcaaaacttgaaattttcaacttgGTAGGACACAGAGAGAGGATAATTGGATAttggaacaaagagagagggCTTTCCAGAGATTTGGTTGCAGATGAGAAATCATTTTCTGAAAGGAAACTGAAGCAACCAATATGGCCAGGTGACACAACTGAGCAGCCAACCAAGTTGAGAATTGGAGTCCCAATCAAAAGAGGCTTCCATGAATTTATGAAAGTGGAAAACCAATCCCCAAATAATGACATTGTAAAAATTTCTGGGTTTGCCATAGATGTGTTTCTAGAAGTTGTCAAAGTTTTACCCTTTCCTCTTCCTTATGAGTTTGTCCCTTTCATGAATAAAAGTACTGGAGAGGCTGCTGGGAGCTACGATATGCTTAAGTTCGATGTTGTTGTTGGAGATGTAACAATTGTAGCTAATCGCACCAAATATGTTGATTTTGCATTGCCATATTCAGAATCAGGAGTATCCATGGTAGTTTTAACAAAGCGTAATGACAGACAGAATATATGGATCTTCTTAAAACCTCTAAGTTGGGATCTTTGGTTGACAATTGGAGCAGCCTTTgtcttaactaattttattatatggcTTCTTGAACATCCTACCAACACTGATTTTCATGGTTCCCGAGAACAACAACTTGGCACAATCTTGTGGTTTTCCTTCTCAACCCTTGTCTTTGCTCAAAATATAAGATGGTTGGACCAACCTACAAAACTGATGGATTCAGCTTTGCCTTCCCACAAAATTCTCCTTTGGTCTCATATTTTTCAAGGGCAATCTTA 1943 0.3829 MENLQKNFQSSFSVIFLILLCLWVPLKAKELIPVGVILDLNSQIGSMANSCISMALHDFYQKNSDYKTRLDLRTRDSNNDIIKAASAAFDLIKNEKVHAIIGPQRSGEARFIMELGRKFQVPIISFSATSPSLSPTLNHFFIRTARDDCSQVKAIACVIEAYGWREVIPIYEDTEYGNGLMPYLNEALEEIDTRVPRRVVIDPHSSETEIFNELNKLKNELGKRLRTRTFVVHMTREQGSKLFSSADKAQMMSEGYAWIVTEGLSAVLRPVKNPIVLDSMQGVLGVRPMVPQGFEKFKRRWKVFTGQESTKSPLTLFGLWAYDTVWALAMAVEKAGLTNSAFQNQNATNNISWYDSGSSLLNQILSTEFQGISGYFNLSKGQLVPSKLEIFNLVGHRERIIGYWNKERGLSRDLVADEKSFSERKLKQPIWPGDTTEQPTKLRIGVPIKRGFHEFMKVENQSPNNDIVKISGFAIDVFLEVVKVLPFPLPYEFVPFMNKSTGEAAGSYDMLKFDVVVGDVTIVANRTKYVDFALPYSESGVSMVVLTKRNDRQNIWIFLKPLSWDLWLTIGAAFVLTNFIIWLLEHPTNTDFHGSREQQLGTILWFSFSTLVFAQNIRWLDQPTKLMDSALPSHKILLWSHIFQGQS 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00953 647 SUPERFAMILY Periplasmic binding protein-like II 437 572 - -
Bva01g00953 647 PANTHER GLUTAMATE RECEPTOR 32 616 - -
Bva01g00953 647 Pfam Receptor family ligand binding region 50 394 IPR001828 -
Bva01g00953 647 Gene3D - 54 385 - -
Bva01g00953 647 Gene3D - 436 555 - -
Bva01g00953 647 CDD PBP1_GABAb_receptor_plant 34 414 IPR044440 -
Bva01g00953 647 Gene3D - 147 410 - -
Bva01g00953 647 Pfam Bacterial extracellular solute-binding proteins, family 3 469 550 IPR001638 -
Bva01g00953 647 Gene3D - 556 627 - -
Bva01g00953 647 SUPERFAMILY Periplasmic binding protein-like I 30 433 IPR028082 -
Bva01g00953 647 SMART GluR_14 441 622 IPR001320 GO:0015276|GO:0016020
Bva01g00953 647 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00953 Bva-Chr1 7353392 7356422 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00953 1 615 Ion Channels AT2G29110 41.810 9.88e-161 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00953 K05387 - jre:109004624 697.582