Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00952 ATGGGAAACCTGCTAAAGCTTCACTCTTCTGTCTCATTCCTCTGCTTTCTCTTGCTATCTACCTGGGTAGGACTTCTGTTTGCTGTGGAGTTAATACCAATTGGTGTAGTTCTTGATACGAATTCCTCTGTTGGAACTGTGGCTCAGAGCTGCATATCCATGGCACACTTGGATTTCTATGAACGCCATCCTAACTATAGAACTAAACTTGATCTTCGAATCAGGGACTCGGAAAATGACGTCGTCACCGCAGCATCTGCCGCATTAGATTTAATCGAGAATGAAAGGGTGCATGCAATTATTGGACCTCAAACATCAGAGCATGCTAAGTTTATAATTGAGCTTGGTGCCAAAGCTAAGATACCAATAATCTCATTTTCTGCTACAAGTCCCTCTCTTTACCCAACCAGAAACCAATTCTTCATTCGCACTGCACAAGATGATTGTTCTCAGGTGAAAGCTATAGCTTCCATCATTGAAGCTTTCGGTTGGCGAGAAATTGTCCCAATTTATGAAAACACAGAATATGGCAAAGGTCTGATCCCATGTCTCAATGATGCCTTTGAAGCAATTGACACACGAGTCCCTTACAGAAGTGTCATTGACCCTCGTTCATATGAAACCCAGATTCTAGAAGAACTACACAAGATTACTAATCACacttcaacaaaaatatttcttgttcATATGACAAAAGAACTTGGATCCAAGTTTTTCCCAGCTGCTGAGAAAGCTGGGATGATGACAGAGGGATATGCATGGATAGTCACTGAAGGGCTTTCTTCTTTGCTAGATCCTATGGAACCAGAAGTGATAAACTCCATGCAAGGGGTCTTGGGAGTAAGGCCAAGAGTTCCCAACACCACTAGGGTTGAGGACTTTAGGAAAAGGTGGAATAGTTCCACTGAAGTGACACTGTTTGGATTGTGGGCTTATGACACTGTTTGGGCATTGGCAATGGCTGTAGAGAAAGCTGGGATAACAAATTCTACATcacagaagaaaaatgatactaaTAACAGCACAGGAATACTTGATTTTGCAGATGTAAGAATATCTGAAACAGGTCCAAGGCTTCTTAATGAAATTCTAGCTACTAAATTCCGTGGCCTCTGGGAATTTCAGTTTGGTTA 1133 0.4051 MGNLLKLHSSVSFLCFLLLSTWVGLLFAVELIPIGVVLDTNSSVGTVAQSCISMAHLDFYERHPNYRTKLDLRIRDSENDVVTAASAALDLIENERVHAIIGPQTSEHAKFIIELGAKAKIPIISFSATSPSLYPTRNQFFIRTAQDDCSQVKAIASIIEAFGWREIVPIYENTEYGKGLIPCLNDAFEAIDTRVPYRSVIDPRSYETQILEELHKITNHTSTKIFLVHMTKELGSKFFPAAEKAGMMTEGYAWIVTEGLSSLLDPMEPEVINSMQGVLGVRPRVPNTTRVEDFRKRWNSSTEVTLFGLWAYDTVWALAMAVEKAGITNSTSQKKNDTNNSTGILDFADVRISETGPRLLNEILATKFRGLWEFQFG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00952 377 PANTHER OS06G0188250 PROTEIN 28 371 - -
Bva01g00952 377 Pfam Receptor family ligand binding region 53 371 IPR001828 -
Bva01g00952 377 Gene3D - 61 153 - -
Bva01g00952 377 CDD PBP1_GABAb_receptor_plant 34 376 IPR044440 -
Bva01g00952 377 PANTHER OS06G0188250 PROTEIN 28 371 - -
Bva01g00952 377 Gene3D - 154 318 - -
Bva01g00952 377 SUPERFAMILY Periplasmic binding protein-like I 32 373 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00952 Bva-Chr1 7345056 7345379 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00952 32 376 Ion Channels AT5G27100 42.407 3.39e-96 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00952 K05387 - pop:18109403 410.223