Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00950 ATGAGAGAGGGATATGCATGGATAGTCACTGAAGGGCTATCTTCTTTGCTGGAACCTATGGAACCAGAAGTGATAAATTCCATGCAAGGGGTCTTGGGAGTAAGGCCAAGAGTTCCCAACACCACTAGGGTTGAGGACTTCAGGAAAAGGTGGAATAGTTCCACTGAAGTGACACTGTTTGGATTGTGGGCTTATGACACTGTTTGGGCATTGGCAATGGCTGTAGAGAAAGCTGGGCTAACAAATTCTACATcacagaagaaaaatgatactaaTAACAGCACAGGAATACTTGATTTTGCAGATGTAAGAATATCTGAAACGGGTCCAAGGCTTCTTAATGAAATTCTAGCTACTAAATTCCGCGGCCTCTCTGAGAATTTCAGTTTGGTTAATGGAACACTAGAACCATCAAAACTTGAGATTTTCAATGTGAGAGAACAAAAAGAGTATATAATTGGATATTGgccaaaggaagaaaatttccTAGATGCAAAACTAAAACTCCAAGATCCGAAATGGCCTGGCAATGCAAAAGAGAAGCCAACAAAGTTGAGAATTGGAATCCCAGTAAGACAGAATATTAATGAGTTCTCAAAAGTGGAAAACttctcttttgatatttttgaagaAGTGGTGAAAAATTTAACCTTTCcccttttttatgaatttctcCCATTTGGTGGAACCTATGATGAACTTCTTATGCAAATCCAAAACAAGGAGTTTGATGCTATAGTTGGGGACATAACAATTGTTGCTAATCGCTCAAACGACATAGATTTTACCTTGCCATTTTTTGAATCAAGTGTGGCAATGGTGGTTTTGACGAAGCATGATGAGAGAAATGACGTGCATTTTCATAAAACCTCTAAGTTGGAAGCTTTGGCTTACAACTG 899 0.3593 MREGYAWIVTEGLSSLLEPMEPEVINSMQGVLGVRPRVPNTTRVEDFRKRWNSSTEVTLFGLWAYDTVWALAMAVEKAGLTNSTSQKKNDTNNSTGILDFADVRISETGPRLLNEILATKFRGLSENFSLVNGTLEPSKLEIFNVREQKEYIIGYWPKEENFLDAKLKLQDPKWPGNAKEKPTKLRIGIPVRQNINEFSKVENFSFDIFEEVVKNLTFPLFYEFLPFGGTYDELLMQIQNKEFDAIVGDITIVANRSNDIDFTLPFFESSVAMVVLTKHDERNDVHFHKTSKLEALAYN 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00950 299 Gene3D - 1 160 - -
Bva01g00950 299 Pfam Bacterial extracellular solute-binding proteins, family 3 204 282 IPR001638 -
Bva01g00950 299 SUPERFAMILY Periplasmic binding protein-like II 182 283 - -
Bva01g00950 299 Gene3D - 178 297 - -
Bva01g00950 299 Gene3D - 36 137 - -
Bva01g00950 299 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 284 - -
Bva01g00950 299 SUPERFAMILY Periplasmic binding protein-like I 2 157 IPR028082 -
Bva01g00950 299 Pfam Receptor family ligand binding region 1 146 IPR001828 -
Bva01g00950 299 PANTHER GLUTAMATE RECEPTOR 1 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00950 Bva-Chr1 7332308 7333349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00950 1 289 Ion Channels AT2G24710 35.821 2.55e-58 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00950 K05387 - pop:18109403 289.656