Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00949 ATGGAGAACCTGCAGAAATGCTTGATCTTATTATTCCTTTGGGGACCCTTGAAAGCCAAGGAACTAATACCCATAGGGGTAATTCTTGATTTGAATTCCCAAATTGGAAGTATGGCTAACAGCTGCATATCCATGGCACTCCATGATTTCTATCAAAAGAATTCTGACTACAAAACCAGACTTGATCTTCGAACCAGGGATTCCAATAACGATATCATCAAAGCAGCATCTGCAGcatttgatttaataaagaaCGAAAAGGTGCATGCAATTATTGGACCACAGAGATCTGGTGAAGCAAGGTTTATAATAGAGCTTGGACGCAAAGCTAAGGTAcccattatttccttttcagcTACAAGCCCATCTCTTTCCCCAACTCTAAACCATTTCTTCATTCGTACGGCACAAGATGACTGCTCTCAAGTGAAAGCCATAGCCTCTGTCATAGAAGCTTATGGTTGGCGCGAAGTCATACCAATCTATGAAGACACAGAATATGGCAATGGTCTAATGCCATATCTCAATGAGGCATTGGAAGAAATTGACACAAGAGTGCCTCATAGGGTTGTCATTGATCCTCATTCTAATGAAACTGAAATCTTCTATGAGCTTAAAAGGCTAAAGAACAAGCTCGGTAAACAATTGCgaacaaaaatatttgttgttcATATGACGTCGGATCAAGGGTCAAAGCTATTTTCAGCAGCAGATAAGGCTCAAATGATTAGTGAAGGATATGCATGGATAGTCACTGAAGGACTATCAGCTGTGCTTGAACCTGTGGAGAATCCAATAGTGTTGGACTCAATGCAAGGTGTCTTGGGAGTAAGGCCAATGGTTCCTCAAGGATTTGAGAAGTTCGAAAAAAGATGGAAAGCTTTCACAGGTCAAGAAAGCACTAAATCCCCCTTAACCCTATTTGGATTATGGGCTTATGACACATTTTGGGCTTTAGCCATGGCCGTAGAGAAAGCTGGGATAACAAATTCAGCTTTCCAGAATCAAAACGCCACCAATAATATTAGTTGGTATGACTCAGGTTCAAGGCTTCTAAACCAAATTCTAAGTACTGAATTCCCAGGGATCTCAGGGTATTTCAACCTGTCTGAAGGGCAATTGGTACCatcaaaacttgaaattttcaacttgGTAGGACACAGAGAGAGGATAATTGGATAttggaacaaagagagagggCTTTCCAGAGATTTGGTTGCAGATGAGAAATCATTTTCTGAAAGGAAACTGAAGCAACCAATATGGCCAGGTGACACAACTGAGAAGCCAACCAAGTTGAGAATTGGAGTCCCAGTCAAAAGAGGCTTCAAGGAATTTATGAAAGTGGAAAGACAATCCTCAAATAATGACATTGTAAAAATTTCTGGGTTTGCCATAGATGTGTTTCTAGAAGTTGTCAAAGTTTTACCCTTTCGTCTTCCTTATGAGTTTGTCCCTTTCATGAATAAAAGTACTGGAGAGGCTGCTGGGAGCTACGATGAGCTTAAGTTCGATGTTGTTGTTGGAGATGTAACAATTGTAGCTAATCGCACCAAATATGTTGATTTTGCATTGCCATATTCAGAATCAGGAATATCCATGGTAGTTTTAACAAAACGTAATGACAGACAGAACATGTGGATTTTCTTAAAACCTCTAAGTTGGGATCTTTGGTTGACAACTGGAGCAGCCTTTgtcttaactaattttattgtatGGCTTCTTGAACACCCTACCAACACTGATTTTCACGGTTCCCGAGAACAACAACTTGGCACAATCATGTGGTTTTCCTTCTCAACCCTTGTCTTTGCTCAAAAGGAGAAGATAGTGAACAATTGGTCAAGACTTGTGCTGATCATATGGATATTTGTGGTACTGATCATAACACAGAGTTACACTGCAAGTTTAGCTTCAATGTTAACTGTTCAAAGATTGCAGCCTGCTTTCATGGACATAGAGGAGATCAAAAGGAATAATTACTATGTGGGGTATCAGAGGGATAGTTTTGTGGAGGACATGCTGAAGGAAACATTGGGATTCAATGATTCCAGCAAGCTGAGGGCATATGAAAGTCCAGAAGAGTTCGACCAAGCCCTGTCAACTGGAAGTGACAATGGTGGGGTGGCTGcaatatttgatgaaatccCATATCTCAATGTCTTCCTTACAAAATATGGCTCTAGATATAAGATGGTTGGACCAACCTACAAAACTGATGGATTCAGCTTTGCCTTCCCACGAAATTCTCCTTTGGTCTCATATTTTTCAAGGGCAATCTTAAATGTCACTGAAGATAAAGACATATTTAGTGGGATTAAGAACAAGTACTTTTCAAGTGGAATATCATCTGGAGATCAAAGTGCCTCTATTACTTCAGACATTACTAGTCTTACAGTGTACAGCTTTGCAGGCCTCCTCCTCATCACTGCAGTCGCTTTCTTACTCTCACTTGTGTGCTATCTGTTTAGCTTTCTGTACTCTGAATGGCATGCTTTGAGGACCATTCCTTCTGAACAAAGATCCTTTTGGTCAATGTTGAACCAAATAGCAAAGCATTATGATCAGAAAGACAGCTCTTTACATCCTCCCACTAGAAGCAACTCTAGAGTATATCCTGCTGCTAGTCCCCAACCTTA 2639 0.3873 MENLQKCLILLFLWGPLKAKELIPIGVILDLNSQIGSMANSCISMALHDFYQKNSDYKTRLDLRTRDSNNDIIKAASAAFDLIKNEKVHAIIGPQRSGEARFIIELGRKAKVPIISFSATSPSLSPTLNHFFIRTAQDDCSQVKAIASVIEAYGWREVIPIYEDTEYGNGLMPYLNEALEEIDTRVPHRVVIDPHSNETEIFYELKRLKNKLGKQLRTKIFVVHMTSDQGSKLFSAADKAQMISEGYAWIVTEGLSAVLEPVENPIVLDSMQGVLGVRPMVPQGFEKFEKRWKAFTGQESTKSPLTLFGLWAYDTFWALAMAVEKAGITNSAFQNQNATNNISWYDSGSRLLNQILSTEFPGISGYFNLSEGQLVPSKLEIFNLVGHRERIIGYWNKERGLSRDLVADEKSFSERKLKQPIWPGDTTEKPTKLRIGVPVKRGFKEFMKVERQSSNNDIVKISGFAIDVFLEVVKVLPFRLPYEFVPFMNKSTGEAAGSYDELKFDVVVGDVTIVANRTKYVDFALPYSESGISMVVLTKRNDRQNMWIFLKPLSWDLWLTTGAAFVLTNFIVWLLEHPTNTDFHGSREQQLGTIMWFSFSTLVFAQKEKIVNNWSRLVLIIWIFVVLIITQSYTASLASMLTVQRLQPAFMDIEEIKRNNYYVGYQRDSFVEDMLKETLGFNDSSKLRAYESPEEFDQALSTGSDNGGVAAIFDEIPYLNVFLTKYGSRYKMVGPTYKTDGFSFAFPRNSPLVSYFSRAILNVTEDKDIFSGIKNKYFSSGISSGDQSASITSDITSLTVYSFAGLLLITAVAFLLSLVCYLFSFLYSEWHALRTIPSEQRSFWSMLNQIAKHYDQKDSSLHPPTRSNSRVYPAASPQP 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00949 879 Gene3D - 547 678 - -
Bva01g00949 879 Gene3D - 427 546 - -
Bva01g00949 879 PANTHER GLUTAMATE RECEPTOR 23 828 - -
Bva01g00949 879 SUPERFAMILY Periplasmic binding protein-like I 20 424 IPR028082 -
Bva01g00949 879 Pfam Bacterial extracellular solute-binding proteins, family 3 460 779 IPR001638 -
Bva01g00949 879 Gene3D - 138 401 - -
Bva01g00949 879 SMART GluR_14 432 780 IPR001320 GO:0015276|GO:0016020
Bva01g00949 879 Gene3D - 46 376 - -
Bva01g00949 879 PIRSF IGluLR_plant 4 877 IPR017103 -
Bva01g00949 879 MobiDBLite consensus disorder prediction 861 879 - -
Bva01g00949 879 Pfam Receptor family ligand binding region 41 385 IPR001828 -
Bva01g00949 879 SUPERFAMILY Periplasmic binding protein-like II 428 779 - -
Bva01g00949 879 Pfam Ligand-gated ion channel 780 813 IPR001320 GO:0015276|GO:0016020
Bva01g00949 879 CDD PBP1_GABAb_receptor_plant 25 405 IPR044440 -
Bva01g00949 879 MobiDBLite consensus disorder prediction 856 879 - -
Bva01g00949 879 CDD GluR_Plant 432 778 - -
Bva01g00949 879 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 23 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00949 Bva-Chr1 7307137 7310526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00949 7 877 Ion Channels AT2G29110 42.746 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00949 K05387 - jre:109004625 979.933