Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00946 ATGGAGAATCTGCAGAAAAGCTTTCAATCTTCATTCTCAGTTATCTACTTGCTCTTATTATGCCACTGGGGACCCTTGAAAGCCAAGGAACTTGTACCTATAGGGGTAATTCTTGATTTGAATTCCTCAATTGGAAGTATGGCTAATAGCTGCATATCCATGGCACTCCATgatttctatcaaaaaaattctgaCTTCAAAACTAGACTTCATCTTCGAATCAGGGATTCCAATAACGATATCATCAAAGCAGCATCTGCAGcatttgatttaataaagaaCGAAAAGGTGCATGCAATTATTGGACCGCAAAGATCTGGTGAAGCAAGGTTTATAATAGAGCTTGGACGCAAAGCTAAGGTAcccattatttccttttcagcTACAAGCCCATCTCTTTCCCCAACTCTAAACCATTTCTTCATTCGTACGGCACAAGATGACTGCTCTCAAGTGAAAGCCATAGCCTCTGTCATAGAAGCTTATGGTTGGCGCGAAGTCATACCAATCTATGAAGACACAGAATATGGCAATGGTCTAATGCCATATCTCAATGAGATATTGGAAGAAATTGACACAAGAGTGCCTCATAGGGTTGTCATTGATCCTCATTCTAGTGAAGATGAAATCTTCTGTGAGCTTAACAAGCTAAAGAACGAGCTCGGTAAAAAATTGCGAACAGGAACATTTGTTGTTCATATGACGCGAGAACAAGGGTCAAAGCTATTTTCATCTGCAGACAAGGCTCAAATGATGAGTGAAGGATATGCATGGATAGTCACTGAAGGACTATCAGCTGTGCTTGAACCTGTGGAGAATCCAATAGTGTTGGACTCAATGCAAGGTGTCTTGGGAGTACGGCCAATGGTTCCTCAAGGATTTGAGAAGTTCAAAAGAAGATGGAAATCTTTCACAGGTCCAGAAAGCGCTGAATCCCCCTTAACCCTATTCGGATTATGGGCTTATGACACAGTTTGGGCGTTAGCCATGGCTGTAGAAGAAGCTGGGATAACAAATTCAGCTTTCCAGAATCAAAACGCCACCAATAATATTAGTTGGGCAATGGTACCatcaaaacttgaaattttcaacttgGTAGGACACAGAGAGAGGATAATTGGATAttggaacaaagagagagggCTTTCCAGAGATTTGGTTGCAGATGAGAAATCATTTTCTGAAAGGAAACTGAAGCAACCAATATGGCCAGGTGACACAACTGAGCAGCCAACCAAGTTGAGAATTGGAGTCCCACTCAAAAGAGGCttcaatgaatttatgaaagtGGAAAGGCAATCCTCAAATAATGACATTGTAAAAGCTTCTGGGTTTGCCATAGATGTGTTTCTAGAAGTTGTCAAAGTTTTACCGTTTCCTTTTCCTTATGAGTTTATCCCATTCATCAATGAAAGTACTGGAGAGCCTGCCGGGAAATACGATGAGCTTGCATTCCCACAAAATTCTCCTTTGGTCTCATATTTTTCAAGGGCAATCTTAAATGTCACTGAAGATAAAGACATATTTGGAGGGATTAAGAACAAGTACttttcaagtaaaataatatctgaAGATCAAAGTGCTTCTATCAAGTCAGACAGTACAAGTCTTACCGTGTACAGCTTTGCAGGCCTCTTCCTCATCGTAGCAGTCACTTTCTTACTCTCACTTGTGTGCTTTCTGTTTAGCTTCTTGTACTCTGAATGGCATGCTTTGAAGACTATTCCTTCCGAACAGAAATCCCTTTGGTCTGTGTTGAACCAAATGGCAAAACATTATGATTG 1784 0.3812 MENLQKSFQSSFSVIYLLLLCHWGPLKAKELVPIGVILDLNSSIGSMANSCISMALHDFYQKNSDFKTRLHLRIRDSNNDIIKAASAAFDLIKNEKVHAIIGPQRSGEARFIIELGRKAKVPIISFSATSPSLSPTLNHFFIRTAQDDCSQVKAIASVIEAYGWREVIPIYEDTEYGNGLMPYLNEILEEIDTRVPHRVVIDPHSSEDEIFCELNKLKNELGKKLRTGTFVVHMTREQGSKLFSSADKAQMMSEGYAWIVTEGLSAVLEPVENPIVLDSMQGVLGVRPMVPQGFEKFKRRWKSFTGPESAESPLTLFGLWAYDTVWALAMAVEEAGITNSAFQNQNATNNISWAMVPSKLEIFNLVGHRERIIGYWNKERGLSRDLVADEKSFSERKLKQPIWPGDTTEQPTKLRIGVPLKRGFNEFMKVERQSSNNDIVKASGFAIDVFLEVVKVLPFPFPYEFIPFINESTGEPAGKYDELAFPQNSPLVSYFSRAILNVTEDKDIFGGIKNKYFSSKIISEDQSASIKSDSTSLTVYSFAGLFLIVAVTFLLSLVCFLFSFLYSEWHALKTIPSEQKSLWSVLNQMAKHYD 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00946 594 CDD PBP1_GABAb_receptor_plant 34 386 IPR044440 -
Bva01g00946 594 Gene3D - 408 484 - -
Bva01g00946 594 Gene3D - 55 153 - -
Bva01g00946 594 SUPERFAMILY Periplasmic binding protein-like I 29 405 IPR028082 -
Bva01g00946 594 PANTHER GLUTAMATE RECEPTOR 32 483 - -
Bva01g00946 594 PANTHER GLUTAMATE RECEPTOR 484 567 - -
Bva01g00946 594 Gene3D - 154 321 - -
Bva01g00946 594 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 32 483 - -
Bva01g00946 594 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 484 567 - -
Bva01g00946 594 Pfam Receptor family ligand binding region 50 344 IPR001828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00946 Bva-Chr1 7275071 7278365 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00946 24 483 Ion Channels AT2G24720 37.647 3.44e-109 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00946 K05387 - jre:109004624 493.426