Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00926 atggCAATACCACTTCCCTCGAACCTTGATCCTTCACTAACGGCCCCAGATTGGATGAACAAAGCTGACAATGCATGGCAGCTCACGGCGGCGACCCTGGTCGGACTTCAAAGCGTGCCGGGGCTGATACTCCTCTACGGCGGAGCCGTCAAGAAGAAGTGGGCAGTGAACTCAGCATTCATGGCACTCTATGCTTTTGCTTGTGTTCTCTTCTGTTGGGTTCTTTGGGGTTATAGAATGTCTTTTGGTGATAGACTTGTTGGTTTCTGGGGAAAGGCTGGTGCTACTCTAGACGAGAATTATCTTTTCGATCAAGCTTATGGTGGATTTTTCCCCAATGCCACAATGGTTTATTTCCAGTTTGCTTTTGCTGCGAttactttgattttgataGCTGGGGCTGTGTTGGGGCGCATGAACTTTTATGCATGGATGTTATTTGTGCCTTTGTGGCTCACTTTCTCCTACACTTTCACTGCATTTAGTATATGGAGTCCTAAGGGTTTTTTCTCTAAGATGGGGATAATAGACTTTGCTGGTGGATTTGTGATACATTTGGCTTCCGGGGTTGCTGGATTCACTGCTGCTTATTGGGTTGGTCCTCGCCTAAACAAGGACCGAGAAAGGTTCCCACCGAACAACATCCTTATCATGTTAGCTGGTGCAGGATTGCTATGGTTGGGCTGGACAGGTTTCAATGGAGGAGCCCCAGTTGCAGCCAATATGGAAACTTCTTTGGCTATTTTGAACACCCATGTATGCACTGCTACCAGCTTGCTTACTTGGGTCATCCTCGATGTCTTATTTTTCCGTAAACCTTCTGTCATTGGAGCTGTTCAGGGCATGACCACTGGTTTAGTCTGCATCACCCCAGCTGCAGGAGTTGTGCAAGGATGGGCAGCACTTCTAATGGGAATATTTTCTGGTTCACTTCCTTGGTTCACCATGATGGTGGTCCATAAGAGATCAAAGCTCCTACAGAAAGTTGATGATACAATGGCAATCCTGCATACTCATGCCATTGCTGGATCCCTCGGAGGTATCTGTGCCGGGCTGTTCGCTGTGCCAAAGCTAAACAGTTTCATGTACAGTGgatattttagatatattgGCTTATTTTATAGTCTACAAATGAAAGATGTCAAAACCGGGTTAAGGCAACTCGGAATTCAGTGCCTCGGGATATTGTTCGTTGTCATAATCAATGTACTAGTCACAAGCTTGATATGCCTCGCTATTCGATTAATTGTTCCTCTAAGAATGTCTGAAGAGGATATGGAAATAGGTGATGAGGCTGCACATGGAGAAGAAGCTTACGCTATTTGGGGTCAGGGTGATAAGCTTGAAACCTCTATCTCAAAGTACAATGGGAATTCATACTATGAAGATGCTGAGGGAggagcaaaaaagaaaaagactgcAGGCCAGGTTGAGATGATGGCATA 1445 0.4422 MAIPLPSNLDPSLTAPDWMNKADNAWQLTAATLVGLQSVPGLILLYGGAVKKKWAVNSAFMALYAFACVLFCWVLWGYRMSFGDRLVGFWGKAGATLDENYLFDQAYGGFFPNATMVYFQFAFAAITLILIAGAVLGRMNFYAWMLFVPLWLTFSYTFTAFSIWSPKGFFSKMGIIDFAGGFVIHLASGVAGFTAAYWVGPRLNKDRERFPPNNILIMLAGAGLLWLGWTGFNGGAPVAANMETSLAILNTHVCTATSLLTWVILDVLFFRKPSVIGAVQGMTTGLVCITPAAGVVQGWAALLMGIFSGSLPWFTMMVVHKRSKLLQKVDDTMAILHTHAIAGSLGGICAGLFAVPKLNSFMYSGYFRYIGLFYSLQMKDVKTGLRQLGIQCLGILFVVIINVLVTSLICLAIRLIVPLRMSEEDMEIGDEAAHGEEAYAIWGQGDKLETSISKYNGNSYYEDAEGGAKKKKTAGQVEMMA 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00926 481 PANTHER AMMONIUM TRANSPORTER 4 480 - -
Bva01g00926 481 PRINTS Rhesus blood group protein signature 120 136 IPR002229 GO:0005887
Bva01g00926 481 PRINTS Rhesus blood group protein signature 216 234 IPR002229 GO:0005887
Bva01g00926 481 PRINTS Rhesus blood group protein signature 247 269 IPR002229 GO:0005887
Bva01g00926 481 PANTHER AMMONIUM TRANSPORTER MEP2 4 480 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bva01g00926 481 Gene3D Ammonium transporter AmtB like domains 8 443 IPR029020 -
Bva01g00926 481 Pfam Ammonium Transporter Family 25 439 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bva01g00926 481 ProSitePatterns Ammonium transporters signature. 177 202 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bva01g00926 481 TIGRFAM amt: ammonium transporter 23 439 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bva01g00926 481 SUPERFAMILY Ammonium transporter 18 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00926 Bva-Chr1 7014561 7017481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00926 114 451 Inorganic Solute Cotransporters AT2G38290 60.651 7.50e-138 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00926 K03320 - gmx:100787856 749.969