Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00900 ATGCATGATCTTATACAAGACATGGGAAAAGAAGTTGTTAAGCAAGATGCCTCATCAAAACTTGGTCAATACAGTAGATTATGGAATCATGAGGATATTGTCAATGTATTGACTACAAATTCAGGGAGTGATTGCATCAAAGGGATAATATACCCTTCAAAGTCTTTACCAAAAGGATTTTATCCTAGAAAAATTGTTATCTTAAAGTTACCAAATGGCAACACCATTTCGTTAAAGCAGCCATTGCAgAAATTCGAAAATCTTATTTGCATGGATCTCTCACTCTGTCAACAACTAACTCAAATACCTGATGTGTCTGGAGCCCCAAATATTAGAGATTTGAAGCTTGAGGGATGCACCAATTTGAAAGAGATTCAGGATTCTGTTGGAGGTCTTACTAAGGTTTTTGATTTAAGTCTTGAGGAATGCACCTCTCTAGAAATATTCCCACATGGAATCCAAATGACATCTCTGAGATTGCTGAATTTTAATGACTGCAGAAGTCTTCAACACTTCCCTGATATATTGGAACAAATGGATAAATTAAAACGTTTTGAAGCGAGACGGACTGGTATTAAGCAGATTCCACATTCCATTTGTTACCTTCCAGGGCttgaagttttattattaCCCCATAATGACAATTTGGTATCCATCCCAGAAAGTGTTAACAAATTAGATAGATTGGAATTCTTTAATCTGGATAATTGCAGGATGCTTCAACAAATTACAGGAATTCCTTCAAATTTGCAGCAACTACAAGCAGATGGTTGTATATCTTTAACCTCACAATCATCAAATGCACTCTGGACTCAGGCACTGCAGGAGGTCAAAGGCTTTAGTATTAAAATGCCAATAACACCTATTCCAGATTGGTTTGATCATCGCTGCAAAGGTGGAAGCTTATCATTTTGGGTTCGCAGGAAGTTCCCTTTCTTCGCTTTTGCAGTTGTCTTGGGCGAATCAACCAGCGAAACATCCTCAAAGTTCGGGGGAGCTGGTGTTAAAATACTTTGCTATAATAATGGTCATAGGATATGGAGCAATACTTCTTTCTATAGATCAAGTGCAGCTGCTGCTGGTCACTA 1088 0.375 MHDLIQDMGKEVVKQDASSKLGQYSRLWNHEDIVNVLTTNSGSDCIKGIIYPSKSLPKGFYPRKIVILKLPNGNTISLKQPLQKFENLICMDLSLCQQLTQIPDVSGAPNIRDLKLEGCTNLKEIQDSVGGLTKVFDLSLEECTSLEIFPHGIQMTSLRLLNFNDCRSLQHFPDILEQMDKLKRFEARRTGIKQIPHSICYLPGLEVLLLPHNDNLVSIPESVNKLDRLEFFNLDNCRMLQQITGIPSNLQQLQADGCISLTSQSSNALWTQALQEVKGFSIKMPITPIPDWFDHRCKGGSLSFWVRRKFPFFAFAVVLGESTSETSSKFGGAGVKILCYNNGHRIWSNTSFYRSSAAAAGH 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00900 362 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 1 39 - -
Bva01g00900 362 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 51 266 - -
Bva01g00900 362 Gene3D Ribonuclease Inhibitor 45 154 IPR032675 -
Bva01g00900 362 Gene3D Ribonuclease Inhibitor 155 283 IPR032675 -
Bva01g00900 362 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 39 IPR044974 GO:0006952
Bva01g00900 362 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51 266 IPR044974 GO:0006952
Bva01g00900 362 SUPERFAMILY L domain-like 54 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00900 Bva-Chr1 6572483 6575040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00900 51 243 WRKY Transcription Factor Family AT4G12020 35.821 1.64e-22 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00900 - - pvu:PHAVU_006G019300g 205.682