Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00889 ATGGATTTGTCACATTCTCAACTACTAACTCAAGTAACCGATGTGTCTGGTGCTCCAAATATAACAACTTTGCAGCTTGAGGGATGCATCAATCTCAAAGTGATTCATGATTCTGTTGGAAGACTTACTAAGCTTCTTGATTTAAGCCTTGAGGGATGCACCAATCTTGAAGTATTCCCTCATGGAATCTATATGACATCTCTTAGATCCCTTAATTTTAATGACTGCGTAAGTCTTCAACACTTCCCAGAAATATTGGGACAAATGGATAACCTTAATCGTATTGATGCAGAAAGGACTGGAATTAAGCAGATTCCACATTCCATTTGTTACCTTCCCAAGCTTGAATCGTTATTTTTACGATTTAATGACAATTTGGAATCAATCCCAGAGAGCATTAACCAATTAGATGCATTGAGAAACCTTAATCTGCACGATTGCAAGAAGCTTCAGCATATTTCAGGATTTCCGCGAAGGTTACAAGATATCTGTGTAGTTGGTTGTATACCTTTAACCTCACAATCATTAAATACAGTATGGTCTCAGGTACTGCAAGAGATCGAATTCTTGAATGTTTCCATGCCCAGGACACGTATTCCGAATTGGTTTGACTATCGCTGCACAAGTGGAAGATTATCATTTTGGGCAAGCAGAAAATACCCTAAGTTTGCTTTTGCAGTTGTCTGCggaaaatcaacaaataagATATCCTCAGAGCTAGTTCATATCATAgttcttatatatttacacGGCCCTCAAGATTTTGTAACAGCGCACTATAGCGGTGGCTATTTCAATAATGAAGGTGGTACCTTCTTACTTGAGCTACGTGAATATCTCACTAACTTTAATCATGATGATTTGAATCTCGTGGAGATCATATGCACAACCAGTTCACCAGACTATGAAATTGAGGAGTGCGGAGTTTATATGTACAAGCAAGATATAAACATAGAAGATATTCAATTCGTGTGTTCCATTCCTAACAACTCGAATATGAATGCGGTGATGTCAAGGGATGCTGAGAAGATTGAGGAAGCAAAGCATCGGACAGAGAGAGCAGTATTTTCTGACCTACGTGAATTTACTCGTGGCTGTCCCATGCCTCTCAACTCAATCATGGAAGCAGTGATGGCAATGGATGATGAGAGCAATGAGGATGCAGAGCCAGGGAAAAGTTCCAACACAGGGTATGTCAAGGAATG 1205 0.3867 MDLSHSQLLTQVTDVSGAPNITTLQLEGCINLKVIHDSVGRLTKLLDLSLEGCTNLEVFPHGIYMTSLRSLNFNDCVSLQHFPEILGQMDNLNRIDAERTGIKQIPHSICYLPKLESLFLRFNDNLESIPESINQLDALRNLNLHDCKKLQHISGFPRRLQDICVVGCIPLTSQSLNTVWSQVLQEIEFLNVSMPRTRIPNWFDYRCTSGRLSFWASRKYPKFAFAVVCGKSTNKISSELVHIIVLIYLHGPQDFVTAHYSGGYFNNEGGTFLLELREYLTNFNHDDLNLVEIICTTSSPDYEIEECGVYMYKQDINIEDIQFVCSIPNNSNMNAVMSRDAEKIEEAKHRTERAVFSDLREFTRGCPMPLNSIMEAVMAMDDESNEDAEPGKSSNTGYVKE 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00889 401 SUPERFAMILY L domain-like 2 193 - -
Bva01g00889 401 PANTHER TMV RESISTANCE PROTEIN N-LIKE 66 162 - -
Bva01g00889 401 PANTHER TMV RESISTANCE PROTEIN N-LIKE 30 153 - -
Bva01g00889 401 Gene3D Ribonuclease Inhibitor 1 194 IPR032675 -
Bva01g00889 401 PANTHER LEUCINE-RICH REPEAT-CONTAINING 66 162 - -
Bva01g00889 401 PANTHER LEUCINE-RICH REPEAT-CONTAINING 30 153 - -
Bva01g00889 401 MobiDBLite consensus disorder prediction 381 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00889 Bva-Chr1 6416120 6417638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00889 1 161 WRKY Transcription Factor Family AT4G12020 37.267 4.66e-18 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00889 - - lja:Lj0g3v0128699.1 149.828