Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00885 ATGGTTgaagaagagaataaagaaactGAGGATATGATTGAGAAAGATCAATTAGTGGCTGTCTTAGATGAGCTGAAGCCTGCTGAAGCTGCTGCAACATCTTCTAGTTCCATAAATGAACAAAGGATCCTCGATTGTAAGAAGAAAAGGGGCCAAATGGTCTGGCCAATATTTTACAAAGTGGAACCGTCGGATGTATTCGATCAGAAAAATAGATATGCAGAAGCAATGGCTAAACATGAAGAGAGGTTCAAAAGTGAGATGGAGAGAGTGAAAGGATGGAGATCAGCTTTGAAGGAAGTAGCTAATTTGTCAAGATGGACTTTCAAAACAGGgtatgaatataaatttatcatggAAATCATAGAAGAGGCCTCCACTAAATTACATCGTGAACGTTTATATATTGTTGGCACATTGCAGATGCATGATCTAATACAACACATGGGAAGAGAAGTTGTTTGGGAAAAAGCTCCTTTAGAACTTGGTAAACGAAGTAGATTATGGTATCATGAAGATGCTCTTAGAGTATTGATTGAAAATTCAGGAACTGATAAAATTGAAGGAATAATGCTTGATTTGCCTCAACGAGAAGAAATACAATGGAGTGGTACTGCCTTTGAGAAGATGAATAATCTAAGAATTCTTATTGTTCGAAATGCAAGCTTTTCAACTAGTCCTAAACATTTGCCAAACAATTTAAGGTTGCTTGATTGGGAGGAATACCCTTCAGAATTTTTACCACAAGGGTTTTATACTAGAAAAGTTGTTATGTTAAAGTTATGTGCTAATCGTCTGAAACTGGCAAAGCCATTCCAGaaatttgaaaagttaACTCACATAGACTTCTCTAGTTCTCAACTTATAACTCAAATACCTGATATGTCTGGAGTTCCAAATATAACAgaattgatattttcaaaCTATAATAACCATTTGGTATCCCTCCCAGAAAGCATTAAACGGTTAGATGGATTGGATGAGCTTCTGGTGAAGAATTGCAAGAAGCTTCGGGAAATTTCTGGAATTCCACCAAATTTGCAAATAATAAATGCCGAAAATTGTCCATCTTTAACCTCACATTCAGTAAATGTGATATGGCTTCAGGCAAAGGAGGTGGAATATTTAACTGTTAGAATGCCCAGAACGCCAATTCCAAATTGGTTTGACCATCACTGTAAAGGTGGAATCTTATGTTTTCGGGCTCGAGGGAAACTTCCCCAAGTAGCTTTTGCACTTGTCTTAAGCAAATCTGGGAACGTGAAATCCTCACATGGAACCGCAGTACGCATTGAATGCCATAATGATGGTCGCAAGATATCAGACAGGCAGTACACATCCAACAATAATGAAGATTGTGTGTTCTTAATGAAGTTGGATAATGATTTTGgcaaatttagaaataatcTTGACTGGAATTTTGTGGAGATCAAGTGCAGAAGCTTGTCatcaaactataaaataagtgAGTGTGGAGTTTATGTCTACAAGCAAGATATAAACATGGAAGATATTCAATTTGAGGATTCAAAGAATGATGCAGAGCTTGAATTAGACGAGTTGATGGAGAAGAATGATGAGGCAAAGTCCAAGAAAACACTCAAACAATTGgttaatatttctttagttttactATGCATTTTTGTTGCTTGGTTGGTTATGGTCTTACGTCGAGGACTTTA 1682 0.3484 MVEEENKETEDMIEKDQLVAVLDELKPAEAAATSSSSINEQRILDCKKKRGQMVWPIFYKVEPSDVFDQKNRYAEAMAKHEERFKSEMERVKGWRSALKEVANLSRWTFKTGYEYKFIMEIIEEASTKLHRERLYIVGTLQMHDLIQHMGREVVWEKAPLELGKRSRLWYHEDALRVLIENSGTDKIEGIMLDLPQREEIQWSGTAFEKMNNLRILIVRNASFSTSPKHLPNNLRLLDWEEYPSEFLPQGFYTRKVVMLKLCANRLKLAKPFQKFEKLTHIDFSSSQLITQIPDMSGVPNITELIFSNYNNHLVSLPESIKRLDGLDELLVKNCKKLREISGIPPNLQIINAENCPSLTSHSVNVIWLQAKEVEYLTVRMPRTPIPNWFDHHCKGGILCFRARGKLPQVAFALVLSKSGNVKSSHGTAVRIECHNDGRKISDRQYTSNNNEDCVFLMKLDNDFGKFRNNLDWNFVEIKCRSLSSNYKISECGVYVYKQDINMEDIQFEDSKNDAELELDELMEKNDEAKSKKTLKQLVNISLVLLCIFVAWLVMVLRRGL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00885 560 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 139 337 IPR044974 GO:0006952
Bva01g00885 560 SUPERFAMILY L domain-like 190 375 - -
Bva01g00885 560 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 49 130 IPR044974 GO:0006952
Bva01g00885 560 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 49 130 - -
Bva01g00885 560 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 139 337 - -
Bva01g00885 560 Gene3D Ribonuclease Inhibitor 178 379 IPR032675 -
Bva01g00885 560 SUPERFAMILY Toll/Interleukin receptor TIR domain 41 107 IPR035897 -
Bva01g00885 560 Gene3D - 28 137 IPR035897 -
Bva01g00885 560 Coils Coil 511 531 - -
Bva01g00885 560 Pfam TIR domain 39 131 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00885 Bva-Chr1 6343553 6348014 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00885 140 358 WRKY Transcription Factor Family AT4G12020 32.083 2.24e-20 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00885 - - gsj:114376984 217.238