Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00884 ATggttgaagaagagaagaaagaaattgaggaTATGATTGAGAAAGATCAATTAGTGGCTGTCTTAGATGAGCTGAAGCCTGCTGAAGCTGCTGCAACATCTTCTAGTTCCATAAATGAACAAAGGTTTAAAAGTGAGATGGAGAAAGTGAAAAGATGGAGATCAGCTTTGGAGGAAGTAGCCAATTTTTCAGGATGGACTTTCAAAACAGGGTATGAATATACATTTATCACGGAAATCATAGAAGAGGCCTCCACTAAATTACATCATGAACGTTTATATATTGTTGGCACATTGCAGATGGATGATTTAATACAGCACATGGGAAGAGAAGTTGTTAGGGAAAAAGCCCCTTCAGAACTTGGTAAACGAAGTAGATTATGGTATCACGAAGATGTTCTTAGAGTATTGATTGAAAATTCAGGAACTGATAAAATTGAAGGAATAATGCTTGATTTGCCTCAACGAGAAGAAATACAATGGAGTGGTACTGCCTTTGAGAAgatgaataatttaagaattctTATTGTTCGAAATGCAAGCTTTTCAACTGGTCCTAAACATTTGCCAAACAATTTAAGGTTGCTTGATTGGGAGGAATACCCTTCAGAATTTTTACCACAAGGGCTTTATACTAGACAAGTTATTGTGTTAAAGTTATGTGCTAATCGTCTCAAACTGGCAAAGCAATTCCAGAAATTTGAGAAGTTAACTCACATAGACTTCTCCAATTCTCAATTTATAACTCAAATACCTAATATGTCTGAAGTTCCAAACATGACCGAATTGATACTTTCGAACTATAATAACCATTTGGTGTCCCTCCCAGAAAGCATTAAAGGGTTAGATGGATTGGAAGAGCTTCTGGTGAAGAATTGCAAGAAGCTTCGGGAAATTTCTGGAATTCCACCAAATTTGCAAATAATAAATGCCGAAAATTGTCCATCTTTAACCTCACATTCAGTAAATGTGATATGGTTGCTGGCACAAAAGGAGGTTGaacatttaattgttaaaatgCCCAAAACACCAATTCCAAATTGGTTTGACCATCATTGTAAAGGTGGAATCTTATCTTTTCGGGCTCGAGGAAAACTTCCCCAAGTAGCTTTTGCACTTGTCTTAAGCAAATCAGGGAACGTGAAATCCTCACATGGAAGCGTAGTAGGCATTGAATGCTATAATGATGGTCGCAAGATATCAGTCAGGCAGTACACATGCAACGATAATGAAGGTTGTGTGTTATTAATGAAGTTGGATAATGATGTtggaaaatttagaaataatcTTGACTGGAATTTTGTGGAGATCAAGTGCAGAAGCTTGTCATCATACTATAAAATACATGAGTGTGGAGTTTATGTCAACAAGCAAGATATAAACATGGAAGATATTCAATTTGAGGAGTCAAAGAATGATGCAGAGCTTGAAACAGACGAGTTGATGGAGAAGAATAATCAGGGAAAGTCAAAGAAAACATTCAAACAATTGgttaatatttctttagttttactATGCATTTTTATTGCTTGTTTGGTTATGGTCTTACCTCGAGgacttta 1562 0.3419 MVEEEKKEIEDMIEKDQLVAVLDELKPAEAAATSSSSINEQRFKSEMEKVKRWRSALEEVANFSGWTFKTGYEYTFITEIIEEASTKLHHERLYIVGTLQMDDLIQHMGREVVREKAPSELGKRSRLWYHEDVLRVLIENSGTDKIEGIMLDLPQREEIQWSGTAFEKMNNLRILIVRNASFSTGPKHLPNNLRLLDWEEYPSEFLPQGLYTRQVIVLKLCANRLKLAKQFQKFEKLTHIDFSNSQFITQIPNMSEVPNMTELILSNYNNHLVSLPESIKGLDGLEELLVKNCKKLREISGIPPNLQIINAENCPSLTSHSVNVIWLLAQKEVEHLIVKMPKTPIPNWFDHHCKGGILSFRARGKLPQVAFALVLSKSGNVKSSHGSVVGIECYNDGRKISVRQYTCNDNEGCVLLMKLDNDVGKFRNNLDWNFVEIKCRSLSSYYKIHECGVYVNKQDINMEDIQFEESKNDAELETDELMEKNNQGKSKKTFKQLVNISLVLLCIFIACLVMVLPRGL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00884 520 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 99 302 - -
Bva01g00884 520 SUPERFAMILY L domain-like 117 321 - -
Bva01g00884 520 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 40 89 - -
Bva01g00884 520 Gene3D Ribonuclease Inhibitor 124 335 IPR032675 -
Bva01g00884 520 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40 89 IPR044974 GO:0006952
Bva01g00884 520 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 99 302 IPR044974 GO:0006952
Bva01g00884 520 Gene3D - 4 96 IPR035897 -
Bva01g00884 520 Coils Coil 467 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00884 Bva-Chr1 6330084 6336353 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00884 99 307 WRKY Transcription Factor Family AT4G12020 31.325 4.93e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00884 - - gsj:114376984 215.698