Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00876 ATGGGAATTCTTCCTAAATGCTTTGGTTTCTCAGATTCAAAGCAAACAACTTCTTCTctttatgcaaataaatacTCAACCCAAATAGAAGAGTTATGCCATCGCTTTTCTCTAGCTCAactccaaaaatcatccaactttgaCGGAAGCCAAATAATTGGAAGGGGAGACTTTGGTAAAGTATACAAGGGTTGTATTTGTATCCAAGGTGTTGCTAAGGAAATTGCATTGAAGCGATTTGAATCGAATTATAGCAAAGTCGTCTCTGAGTTCTATACTGAAATTAAGCTGTTGTGCCAGCTTGGTCCCCCAAATTTGGTCTCACTTATAGGATTTTGCTCTGAGAAAGATCAGAATATTAGTGTCTGTGAATACATGTCCAATGGAAGTCTTGCAGATCACCTACTTGGCAATAGATGGGAGCCACTTCCATGGAAGAGAAGGATTGAAATTTGCATAGTGTA 464 0.3578 MGILPKCFGFSDSKQTTSSLYANKYSTQIEELCHRFSLAQLQKSSNFDGSQIIGRGDFGKVYKGCICIQGVAKEIALKRFESNYSKVVSEFYTEIKLLCQLGPPNLVSLIGFCSEKDQNISVCEYMSNGSLADHLLGNRWEPLPWKRRIEICIV 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00876 154 Pfam Protein tyrosine and serine/threonine kinase 51 152 IPR001245 GO:0004672|GO:0006468
Bva01g00876 154 ProSiteProfiles Protein kinase domain profile. 47 154 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00876 154 ProSitePatterns Protein kinases ATP-binding region signature. 53 78 IPR017441 GO:0005524
Bva01g00876 154 Gene3D Transferase(Phosphotransferase) domain 1 22 154 - -
Bva01g00876 154 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 26 153 - -
Bva01g00876 154 SUPERFAMILY Protein kinase-like (PK-like) 44 152 IPR011009 -
Bva01g00876 154 PANTHER OS07G0166700 PROTEIN 26 153 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00876 Bva-Chr1 6235031 6235495 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00876 17 153 Receptor kinase-like Gene Family AT2G21480 45.652 7.88e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva01g00876 PK_Tyr_Ser-Thr 8.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00876 - - lja:Lj1g3v3051570.1 142.51