Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00875 ATGGGAATCCTTCCAAAATGCTTTGGTTTCACTGATTCCAAGCATACAATTGCAGAAGCAACTGCAAACAAATCTTCAACTTCAGCCCCAATAGAAGAGCTTTGCCGTCGATTTTCCTTTGCACAAATCCGAAAAATAACAGGAAACTTCCACAAAAGCCGAATAATTGCAACCCTACCCGTCTGTGACTTATACAGGGCTTGTATCGATATACAAGGTACTGTTCGTGAAATTGCAATAAAGAAATTCCGATACAACTCCGATCAACTCCTCGCCGAGTTCAAGAACGAAATTCAGATCCTCTGTCAACTTCGGCACCCAAATTTGGTATCCCTAATAGGATTTTACAAAGATGAAAGCCGGATGATTTCCGCGTTTGAGTACATGCCCCATGGGTctctttattatcatttacTCGGTAAAGTAAAGAAGCCACTTTTCTGGAAGAGAAGACTTCAAATCTGCATAGGAGTAGCTCGTGGGTTGCATTACCTTCACGCAGGAGTCAAGCGAACCATTTTCCACCGTGATGTGCAACCGAAGAACATTCCTTTGGATGAGAATTTTGTGCCTAAACTAGCAAATTTCAAGTACTGTTTAACGGGATCACACGCTATGTCTAAACCCAAACCAATGAATTTAGACATGGTTGTTGGTTCGTTTGGATATATAGCGCCTGAGTGTTATagggattttattttcacagaTAAGTGTGACGTTTATTCATTTGGGATGGTTCTATTGGTAGTGCTGTGTGCAATGGAGGCCTccacaatttataaaaagatgGGTGAAACAGAGGAACAGGATGTGAATGATGCTGAGAGTGTGCTTTTTGAACGGTCACATAGCTTTGGCAAGCAAGAGGAAGCAGAGGCCTTTAATCCTGTCAAGTG 896 0.3996 MGILPKCFGFTDSKHTIAEATANKSSTSAPIEELCRRFSFAQIRKITGNFHKSRIIATLPVCDLYRACIDIQGTVREIAIKKFRYNSDQLLAEFKNEIQILCQLRHPNLVSLIGFYKDESRMISAFEYMPHGSLYYHLLGKVKKPLFWKRRLQICIGVARGLHYLHAGVKRTIFHRDVQPKNIPLDENFVPKLANFKYCLTGSHAMSKPKPMNLDMVVGSFGYIAPECYRDFIFTDKCDVYSFGMVLLVVLCAMEASTIYKKMGETEEQDVNDAESVLFERSHSFGKQEEAEAFNPVK 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00875 298 Pfam Protein tyrosine and serine/threonine kinase 71 263 IPR001245 GO:0004672|GO:0006468
Bva01g00875 298 PANTHER TYROSINE KINASE FAMILY PROTEIN 25 271 - -
Bva01g00875 298 SUPERFAMILY Protein kinase-like (PK-like) 40 252 IPR011009 -
Bva01g00875 298 Gene3D Transferase(Phosphotransferase) domain 1 129 292 - -
Bva01g00875 298 Gene3D Phosphorylase Kinase; domain 1 11 128 - -
Bva01g00875 298 ProSiteProfiles Protein kinase domain profile. 50 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00875 298 PANTHER OS07G0166700 PROTEIN 25 271 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00875 Bva-Chr1 6230224 6231306 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00875 20 252 Receptor kinase-like Gene Family AT5G38990 46.610 3.21e-62 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva01g00875 PK_Tyr_Ser-Thr 1.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00875 - - adu:107486597 246.899