Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00874 ATGAGAATCCTCACAAAATGCTTTGGTTTCCCTGATTTGAAGGATACAAATTCATCTCTACAAGCCAACCAACCTTCAACCCAGATAGAGGAGCTATGCAATCGCTTTTCTCTAGCTGAACTACGAAAATCAACCAACAACTTCCACATAAGGCGAAAAATTGGAAGGGGAAGCTACGGTGATGTATTCATTGGTTGTATTTGCATCCAAGGTGAATCTAAGCAAATTGCAGTCAAGCGATTAGAATCAAATTCTAGCCATGGCATCTCTGAGTTCCTGAATGAAATTCAATTGCTGTGCCAGATTCGGCACCCAAATCTAGTCCCACTCTTGGGATTTTGCagtgagaaagaagagaagctgCTTGTATACAAGTACATGCTAAAGGGAACACTCTCTGATCACTTAAACCTCGCAGATGGATTCAACAATTTGGAACCATTGTCATGGAAGAAAAGGTTAGAAATCTGCATAGGAGCTGCAAGGGGTTTGCATTATCTTCACACAGGAGCCAAGCGTAGCATATTTCACCGCCATGTAAAACCTGCTAACATTGTTCTGGATAAGAATTGGGTGCCTAAACTCACAGATTTTGGGTTGTCCTTGCAAGGACCGAATTCTATGTCAAAGCCAAAGCCAATTGTGGTGGAAAGAATCCAAGGCACTGATGGGTTCATGGCACCTGAGTATTGTATGAACTTTATATTTACAGATAAATGTGACGTCTACTCTTTTGGTGTTGTTCTGGTGATAGTTCTATGTGGAAAGGActttgattcaattttttggaAGATAAACGAGTTAGACAAGTCAAAGAACTCGAGTTTGCCATGTACTTGGAAAAACTTGGCCCTGGGAGTGATTGATTTTGTGCAGCAAGGAAAGGGTGAAGAGATTATTGATCCAATTCTGATGGGAAAAATTGCACCCGAGTGTTGGGAAATTTTCATGGATATTACACAAAGATGCTTGCTTCTAGATCCAATTGAAAGGCCTATAATGGGTGAAGTGGAGGTGGAACTCGAGCATGCTCTGGCATTGCAGCAGGAAGCAGATGCTATTAACTCTGATACTGGTTTTAGCTTAATATTCGATCATTTGTG 1103 0.398 MRILTKCFGFPDLKDTNSSLQANQPSTQIEELCNRFSLAELRKSTNNFHIRRKIGRGSYGDVFIGCICIQGESKQIAVKRLESNSSHGISEFLNEIQLLCQIRHPNLVPLLGFCSEKEEKLLVYKYMLKGTLSDHLNLADGFNNLEPLSWKKRLEICIGAARGLHYLHTGAKRSIFHRHVKPANIVLDKNWVPKLTDFGLSLQGPNSMSKPKPIVVERIQGTDGFMAPEYCMNFIFTDKCDVYSFGVVLVIVLCGKDFDSIFWKINELDKSKNSSLPCTWKNLALGVIDFVQQGKGEEIIDPILMGKIAPECWEIFMDITQRCLLLDPIERPIMGEVEVELEHALALQQEADAINSDTGFSLIFDHL 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00874 367 ProSiteProfiles Protein kinase domain profile. 48 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00874 367 Pfam Protein kinase domain 48 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00874 367 Gene3D Phosphorylase Kinase; domain 1 12 126 - -
Bva01g00874 367 PANTHER OS07G0166700 PROTEIN 25 364 IPR045272 GO:0004714|GO:0006468
Bva01g00874 367 PANTHER TYROSINE KINASE FAMILY PROTEIN 25 364 - -
Bva01g00874 367 ProSitePatterns Protein kinases ATP-binding region signature. 54 79 IPR017441 GO:0005524
Bva01g00874 367 SUPERFAMILY Protein kinase-like (PK-like) 24 340 IPR011009 -
Bva01g00874 367 SMART serkin_6 48 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00874 367 Gene3D Transferase(Phosphotransferase) domain 1 127 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00874 Bva-Chr1 6228870 6229973 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00874 15 352 Receptor kinase-like Gene Family AT3G51550 42.183 5.88e-77 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva01g00874 Pkinase 4.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00874 - - adu:107486597 343.969