Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00871 GAACAGGTAAACAACTCTGTTGCCATTGAGAAAGTTGTGTGAAAACCTCAGATGGGAATCCTTCCGAAATGCTTTGGTTTCACTGATTCCAAGCATACAATTTCAGCTGCAACTGCAAACAAAACTTCAACTTCAACCCCAATAGAAGAGCTTAGCCATCGATTTTCCATTTCACAACTCCGAAAAATAACAGGAAACTTCCACAAAAGCCGAATAATTGGAACCCTACCCATCTGTGACGTATATAGGGCTTGTATCGATATCCAAGGTACTGTTCGTGAAATTGCAATAAAGAAATTCCGATGCAACTCCGATCAACTCCTCGCCGAGTTCAAGAACGAAATTCAGATCCTCTGTCAACTTCGGCACCCAAATTTGGTATCCCTAATGGGATTTTACAAAGATGAAAGCCGGATGATTTACGTGTATGAGTACACGCCCAATGGGCTTCTTTATGATCATTTACTCGGTAAAGTAAAGGAGCCACTTTTCTGGAAGAGAAGACTTCAAATCTGCATAGGAGTAGCTCATGGGTTGCATTACCTTCACGCAGGAGTCAAGCGAACTCTTTTCCACCGTGATGTGCAACCGATGAACATTCTTTTGGATGAGAATTTTGTGCCTAAACTAGCAAATTTCAAGTACTGTTTAACGGGACCACACGCTATGTCTAAACCCAAACCAAAGAATTTGGACATGGTTGTTGGTTCGTTCGGATATATAGCTCCTGAGTGTTACagggattttattttcacagaTAAGTGTGACGTTTATTCATTTGGGATGGTTCTATTGGTAGTACTGTGTGCAATGGAGCCCTccacaatttataaaaagatgGTTGAAACAGAGAAACAGGATGTTAATGATGTTGAGAGTGTGCTTTTTGAAGGGTCACATAGCTTTGGAGAGCAAATATGTAGCTTTTTACAGAAAGGGATGGGTTATGTGATTATTGATCCATTTCTCATAGGAAAAATTGCCCCTCAGTGTTGGAAGATGTTCATGGATATTGCAGAAAAATGCTTGCTTGAAGATCCAAGTGAACGGCCTACAATGGGAGAAGTGGAGCTGGAACTTGAGCATGCTTTGGCTTTGCAGGAGGAAGCAGAGGCCTTTAATTCTGTTAAGTGATACTACCCATTTGAAAGTTGCAATAGCGCCAAAAcctgattttgttttgtccCCATTTTTACTCTAAATGTGGTTTGATATTCGTCTTTGCACTTTCATTCTCTGTGATGAGTTCAATAAGTCTAGTATAAATAGATATTGAGGAGATTACCCTTTACTCCTTTAGTTGTGATGGAAATCAACTACTTTTCAGACGTAGGCGTTGTATGTATGTGTTACTATAGACTGTAAAGAATTTTgttatgcattttaaaaaagttatccCTCTTCCAGCTgattatttcaaattgagGTTTCGTTAAGACAAGTTTTTCTCACCTGGAGTTTATTCCATTGTTGCTCACAGACAAGAAATGACCCCTCCGTTGTTGTACGTTGAGTATCCGAACTGAACGTGTGGCTACTTGCTAACATGATTTTATCACTTTGTCATTTTTGGTTCTGTAGCAAGTAAAACTGCTTTTGTATTAACTTCATCTACGATCTGTCTAATATACACAGGTAATAGTGAACTAATCAGTTAATGGGGCTATATCTAATACGCAGACGTGTtcgttttgatttttaatgaaGACACGCCGTGTGGTTCTATGCCTCTGAAATTGTGCCTTTTAAAATGCAGAAAGATGCTTGCTTTTTGAGCCAAATGAAAGTCCAGCAATGGTTGAGCTGGAGCTGGAACTTAAGCATGTTCTAGCATTGCAAGAAGAGGCAAATAATACCAACTTCATCATGttgatattcatttttactAGACTCACCGTGGTGTCCCAGGCCTCTGAATAGTGCccttcaaaattcttatacGCGTTAACTGTGGAAGACATCAAGGTTGACATTATGACCGGGTACACATCTCAGTTGCTAGCCCACCATTTGTCCCAGGACTATGAATACATGTCCTCttagtttatttgtttccATAATTAAGCTGATTCCTCAGCTGTTATCAGCTGAGACAACTCTGTAGCTGATCTCTCGAAATGAGAATCCTCACAAAATGCTTTGGTTTCCCTGATTTGAAGGATACAAATTCATCTCTACAAGCCAACCAACCTTCAACCCAGATAGAGGAGCTATGCAATCGCTTTTCTCTAGCTGAACTACGAAAATCAACCAACAACTTTCACATAAGGCGAAAAATTGGAAGGGGAAGCTACGGTGATGTATTTATTGGTTGTATTTGCATCCAAGGTGAATCTAAGCAAATTGCAGTAAAGCGGTTAGAATCAAATTCTAGCCATGGCATCTCTGAGTTCCTGAATGAAATTCAATTGCTGTGCCAGCTTCGGCACCCAAATCTAGTCCCACTCTTGGGATTTTGCagtgagaaagaagagaagctgCTTGTATACAAGTACATGCTAAAGGGAACACTCTCTGATCACTTAAACCTCGCAGATGGATTCAACAATTTGGAACCATTGTCATGGAAGAAAAGGTTAGAAATCTGCATAGGAGCTGCAAGGGGTTTGCATTATCTTCACACAGGAGCCAAGCGTAGCATATTTCACCGCCATGTAAAACCTGCTAACATTGTTCTGGATAAGAATTGGGTGCCTAAACTCACAGATTTTGGGTTGTCCTTGGAAGGACCGAATTCTATGTCAAAGCCAAAGCCAATTGTGGTGGAAAGAATCCAAGGCACTGATGGGTTCATGGCACCTGAGTATTGTATGAACTTTATATTTACAGATAAATGTGACGTCTACTCTTTTGGTGTTGTTCTGGTGATAGTTCTATGTGGAAAGGActttgattcaattttttggaAGATAAACGAGTTAGACAAGTCAAAGAACTCGAGTTTGCCCTCAGAAGGGTGTACTTGGAAAAACTTGGCCCTGGGAGTGATTGATTTTGTGCAGCAAGGAAAGGGTGAAGAGATTATTGATCCAATTCTGATAGGAAAAATTGCACCCGAGTGTTGGGAAATTTTCATGGATATTACACAAAGATGCTTTCTTCTAGATCCAATTGAAAGGCCTACAATGGGTGAAGTGGAGGTGGAACTCGAGCATGCTCTGGCATTGCAGCAGGAAGCAGATGCTATTAACTCTGATACTGGTTTTAGCTTAATATTCGATCATTTGTGATGCAAT 3236 0.3829 EQVNNSVAIEKVVKPQMGILPKCFGFTDSKHTISAATANKTSTSTPIEELSHRFSISQLRKITGNFHKSRIIGTLPICDVYRACIDIQGTVREIAIKKFRCNSDQLLAEFKNEIQILCQLRHPNLVSLMGFYKDESRMIYVYEYTPNGLLYDHLLGKVKEPLFWKRRLQICIGVAHGLHYLHAGVKRTLFHRDVQPMNILLDENFVPKLANFKYCLTGPHAMSKPKPKNLDMVVGSFGYIAPECYRDFIFTDKCDVYSFGMVLLVVLCAMEPSTIYKKMVETEKQDVNDVESVLFEGSHSFGEQICSFLQKGMGYVIIDPFLIGKIAPQCWKMFMDIAEKCLLEDPSERPTMGEVELELEHALALQEEAEAFNSVKYYPFESCNSAKTFCFVPIFTLNVVYSSLHFHSLVQVYKILRRLPFTPLVVMEINYFSDVGVVCMCYYRLRILLCILKKLSLFQLIISNGFVKTSFSHLEFIPLLLTDKKPLRCCTLSIRTERVATCHDFITLSFLVLQVKLLLYLHLRSVYTQVIVNSVNGAISNTQTCSFFLMKTRRVVLCLNCAFNAERCLLFEPNESPAMVELELELKHVLALQEEANNTNFIMLIFIFTRLTVVSQASECPSKFLYALTVEDIKVDIMTGYTSQLLAHHLSQDYEYMSSFICFHNADSSAVISDNSVADLSKESSQNALVSLIRIQIHLYKPTNLQPRRSYAIAFLLNYENQPTTFTGEKLEGEATVMYLLVVFASKVNLSKLQSGNQILAMASLSSMKFNCCASFGTQISHSWDFAVRKKRSCLYTSTCREHSLITTSQMDSTIWNHCHGRKGKSAELQGVCIIFTQEPSVAYFTAMNLLTLFWIRIGCLNSQILGCPWKDRILCQSQSQLWWKESKALMGSWHLSIVTLYLQINVTSTLLVLFWFYVERTLIQFFGRTSTSQRTRVCPQKGVLGKTWPWELILCSKERVKRLLIQFEKLHPSVGKFSWILHKDAFFIQLKGLQWVKWRWNSSMLWHCSRKQMLLTLILVLAYSIICDA 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00871 1030 Gene3D Phosphorylase Kinase; domain 1 27 144 - -
Bva01g00871 1030 PANTHER TYROSINE KINASE FAMILY PROTEIN 565 601 - -
Bva01g00871 1030 Pfam Protein kinase domain 67 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00871 1030 SUPERFAMILY Protein kinase-like (PK-like) 41 358 IPR011009 -
Bva01g00871 1030 Gene3D Transferase(Phosphotransferase) domain 1 146 379 - -
Bva01g00871 1030 PANTHER OS07G0166700 PROTEIN 41 378 IPR045272 GO:0004714|GO:0006468
Bva01g00871 1030 Coils Coil 579 599 - -
Bva01g00871 1030 ProSiteProfiles Protein kinase domain profile. 66 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00871 1030 PANTHER OS07G0166700 PROTEIN 565 601 IPR045272 GO:0004714|GO:0006468
Bva01g00871 1030 PANTHER TYROSINE KINASE FAMILY PROTEIN 41 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00871 Bva-Chr1 6204436 6207672 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00871 28 367 Receptor kinase-like Gene Family AT2G21480 42.857 1.27e-68 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Bva01g00871 PK_Tyr_Ser-Thr 1.7e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00871 - - adu:107486597 317.005