Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00865 ATGGTGGAAGATGGTGGAGATGGAGTTGCTATTGGTGCTCGTTGTGCCGAAGACTGGTTGTTGCATGCACAGGAGCTTGTACCTGTCGCTCTTGGGAAGGCAAAAGAGGTTAAGGGCTTCCCTGTTAGGTGGAAGATGATCATTTCCAAATTAGAACAGATCCCATCTCGTTTATCAGACTTGTCAAGCCACCCTTGCTTCTCAAAGAATGCTCTTTGCAAGGAGCAAATGCAGGCTGTGTCAAAAACTCTCAATGAAGCCATTGAATTGGCTGAGTTGTGTGTGAAGGAGAAGTATGAGGGCAAGCTCCAAATGCAGAGTGATCTTGATGCATTATCTGGGAAACTGGATTTGAACTTAAGGGATTGTGGCCTCTTGATCAAGACTGGTGTGCTTGGTGAGGCTACGTTACCTTTGGCCGTGTCTGGTCCTGTGGCTGAGTCAGATGTTGCAACCCATACCACTATAAGGGAATTGCTTGCGCGGCTTCAGATCGGGCACCTGGAAGCAAAGCACAGAGCTTTGGATGGTCTTGTTGAGGTTATGAAAGAGGATGAAAAGAATGTTTTAACTGTTCTGGGCAGAAGCAATATTGCTGCTTTGGTTCAGTTGCTAACAGCAACATCTCCACGGATAAGGGAGAAAACAGTTACTGTTATATGCTCTCTTGCTGAATCAGGAAATTGTGAGGATTGGCTAGTTTCTGAAGGAGTTCTTCCTCCTCTTATTAGACTTGTTGAATCTGGAAGTGCAGTGGGTAAAGAAAAGGCTACAATTTCTCTCCAGAGACTGTCAATGTCCTCAGAAACAGCACGTGCCATTGTTGGACATGGTGGTGTTCATCCATTAATTGAACTTTGTCAGACTGGTGATTCTGTTTCACAAGCTGCTGCTGCTTGTACCTTAAAGAATATATCAGCTGTTCCTGAGGTGCGGCAAGCTCTAGCCGAAGAAGGGATTGTGAAGGTTATGATCAATCTCCTTAACTGTGGTATTCTGTTGGGCGCCAAAGAGTATGCTGCAGAATGCCTGCAGAATCTCACTGCAAGCAATGTCAATCTACAAATGTCTGTTATCTCAGAAGGCGGTCTCAGAAGTCTTATGGCTTATCTCGATGGTCCACTGCCTCAAGAATCTGCAGTTGCCGCGTTGAGGAATTTGGTTGGATTAGTTTCTGATGAAGTTTTAGTTTCTCTGGGTTTCCTTCCTCGGTTGGTTCACGTGTTAAAGTCTGGATCTTTAGGTGCTCAGCAAGCTGCAGCTTCTGCAATTTGCAAGTTTTGCAGTTCAAatgagatgaagaaaatggtTGGTGAAGCTGGGTGCATCCCTCTCCTTGTCAAGATGCTTGAGGCTAAATCAAACAGTTCTAGGGAGGTTGCTGCACAAGCAGTGGCAAGCCTGATAACATTATCCCAGAATCGAAGAGAGGTCAAGAAGGATGGTAAAAGCGTGCCGAATCTGGTGCAATTGCTTGATCCAAGTCCACAAAACACTGCTAAAAAATATGCAGTTTCCTGCCTTGGATCACTTGCTTCTAGTAGGAAATGCAAGAAGCTGATGGTCTCATATGGAGCAATTGGGTATCTGAAGAAACTCACGGAGATGGACATTCCAGGAGCCAAGAAGCTACTAGAGCGATTGGAAAGAGGGAAACTGAGAAGCTTATTAAgcagaaaata 1682 0.4447 MVEDGGDGVAIGARCAEDWLLHAQELVPVALGKAKEVKGFPVRWKMIISKLEQIPSRLSDLSSHPCFSKNALCKEQMQAVSKTLNEAIELAELCVKEKYEGKLQMQSDLDALSGKLDLNLRDCGLLIKTGVLGEATLPLAVSGPVAESDVATHTTIRELLARLQIGHLEAKHRALDGLVEVMKEDEKNVLTVLGRSNIAALVQLLTATSPRIREKTVTVICSLAESGNCEDWLVSEGVLPPLIRLVESGSAVGKEKATISLQRLSMSSETARAIVGHGGVHPLIELCQTGDSVSQAAAACTLKNISAVPEVRQALAEEGIVKVMINLLNCGILLGAKEYAAECLQNLTASNVNLQMSVISEGGLRSLMAYLDGPLPQESAVAALRNLVGLVSDEVLVSLGFLPRLVHVLKSGSLGAQQAAASAICKFCSSNEMKKMVGEAGCIPLLVKMLEAKSNSSREVAAQAVASLITLSQNRREVKKDGKSVPNLVQLLDPSPQNTAKKYAVSCLGSLASSRKCKKLMVSYGAIGYLKKLTEMDIPGAKKLLERLERGKLRSLLSRK 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00865 560 Gene3D - 146 373 IPR011989 -
Bva01g00865 560 Gene3D - 374 550 IPR011989 -
Bva01g00865 560 SMART arm_5 430 470 IPR000225 GO:0005515
Bva01g00865 560 SMART arm_5 471 513 IPR000225 GO:0005515
Bva01g00865 560 SMART arm_5 267 307 IPR000225 GO:0005515
Bva01g00865 560 SMART arm_5 351 389 IPR000225 GO:0005515
Bva01g00865 560 SMART arm_5 308 349 IPR000225 GO:0005515
Bva01g00865 560 SMART arm_5 185 225 IPR000225 GO:0005515
Bva01g00865 560 SMART arm_5 392 429 IPR000225 GO:0005515
Bva01g00865 560 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 560 - -
Bva01g00865 560 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 237 279 IPR000225 GO:0005515
Bva01g00865 560 Pfam Armadillo/beta-catenin-like repeat 268 307 IPR000225 GO:0005515
Bva01g00865 560 Pfam Armadillo/beta-catenin-like repeat 430 468 IPR000225 GO:0005515
Bva01g00865 560 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 441 477 IPR000225 GO:0005515
Bva01g00865 560 SUPERFAMILY ARM repeat 154 537 IPR016024 -
Bva01g00865 560 PANTHER ARMADILLO/BETA-CATENIN-LIKE REPEAT PROTEIN 1 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00865 Bva-Chr1 6154702 6157996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00865 379 543 U-box Gene Family AT3G54790 27.545 9.79e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00865 - - gmx:100789140 900.968
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva01g00865 01 6154702 6157996 Bva01g00865 01 6154702 6157996 ECH