Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00864 ATGGCAGGAGCAGGAGCAGGAGCTGAAGCTAGCCAATATGCTTCTGCTACAGCCACTCCTGCGAATAAAACTGTCCAATCGAGCAAACCCAGCACGAGAAGGTTCATCGGGGTGCGGCAGAGACCTTCCGGGAGGTGGGTGGCTGAGATTAAAGACTCCTCTCAGCATGTCAGGTTATGGCTTGGAACCTACGACACACCAGAAGAAGCAGCTAGGGCTTACGATGAAGCAGCTCGAGCTCTGCGTGGAGAAAATGCCCGAACCAATTTCGCGGCGACGAACCCCGCTCCGGGCCAATCTGGGTCGGCTCCTTGTGGCGAACCCCTTTCTGGGTCCGATGGAAGGCATGTCTTGAGCTTCGCTTCCTTGAAAGCCAAGCTAAGCAAGAACCTGCAGAGCATCATGGCTAGGGCAAGTGATGCCAAGTCTTCAAAGAGTAGGGTGAGTGACCATTTCACCTTTGCCAGCATATTTCACCGCAACAGGAGTCTCCAGTATCAAATCCATGATATCAAGAACATGGATAGAGTGGTGCAGCCTAGTATAATTGTGCCTCCTGTTGATCAAACTCTTCAGTCTTCGCCCTCTTGGGAAACCTCTAGTACTGTATCTGATTGCAGCTCGGAGTGGGTCGGGTTCCGGCAACCTGGGTTGGATTCCGACGGATCGGATGTAGGAGAAGTTGGGGTTGGGGAGCAAGGGCTGTTGGAACAATTGTTGGGGTGGGTGGATAGTCCCGATCGTACGATTTGTGCTAATGGAAGTGAAGAGGGTTCGAGGAGTAAGAGGTTTAAGGTGTCTTCTTCGGTGCTCGTGCCTCCAACTTTTAGTAGCTCTCCTCTTCACGAGGTTTGTGGTTCACCATATAGTGCTTGTGCCTCTCCATATAATAATGGTGGGAAGTG 905 0.5193 MAGAGAGAEASQYASATATPANKTVQSSKPSTRRFIGVRQRPSGRWVAEIKDSSQHVRLWLGTYDTPEEAARAYDEAARALRGENARTNFAATNPAPGQSGSAPCGEPLSGSDGRHVLSFASLKAKLSKNLQSIMARASDAKSSKSRVSDHFTFASIFHRNRSLQYQIHDIKNMDRVVQPSIIVPPVDQTLQSSPSWETSSTVSDCSSEWVGFRQPGLDSDGSDVGEVGVGEQGLLEQLLGWVDSPDRTICANGSEEGSRSKRFKVSSSVLVPPTFSSSPLHEVCGSPYSACASPYNNGGK 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00864 301 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Bva01g00864 301 Gene3D AP2/ERF domain 33 92 IPR036955 GO:0003700|GO:0006355
Bva01g00864 301 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Bva01g00864 301 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
Bva01g00864 301 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Bva01g00864 301 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Bva01g00864 301 MobiDBLite consensus disorder prediction 12 34 - -
Bva01g00864 301 MobiDBLite consensus disorder prediction 1 42 - -
Bva01g00864 301 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 7 257 - -
Bva01g00864 301 CDD AP2 34 93 IPR001471 GO:0003700|GO:0006355
Bva01g00864 301 SUPERFAMILY DNA-binding domain 35 92 IPR016177 GO:0003677
Bva01g00864 301 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 7 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00864 Bva-Chr1 6150884 6151789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00864 19 99 AP2-EREBP Transcription Factor Family AT5G19790 62.963 2.84e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva01g00864 AP2 1.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00864 K09286 - gmx:100799444 320.857