Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00861 ATGTCTGCTGATGCTAACGAGTCTTCCATGGTGGGAGCATTAGAAAGGGGAGCTACACGTTACATTGCGAAGCCAATTATGTTCTCTGATTTGGGTGGCCTATGGCAGTTTGCAACCTGGAGCAAgtcaaaagaaatgagaaaggaCAGTGAGGgtgcaaaaagtaaaaaacaacCAGAACAGAAGGTTGgcaaaaatgaagaaggaaaagccATTGGAGGACAATTAgtatttaaaaggaaaaggctTACATGGACAAAAGAATTGCACCAGAGGTTCATGGATGCTATAAACACAATTGGAGTTGAAAaagCAAGGCCCAAGAAAATTCTTCAGCTTATGAATGTGCCAGGGctcaagaaagagaaagtatCGAGCTATTTACAgATTTCTGTGTCTCAGAAATATCGTCTCTCCTTAAAACGTCAAGCGGAAGCACGTATGCAGAGAAACAACATAACCTTGTCTCAATCAAGCTTGGGATCCGATTCATACAATCTGTATCAGACACAAAATTATCTTCCAACCTCAAAGCTGCAATCTTTGGCCTATGATCCCAACACCATTTACAGAAACTACAACTATCCCAGTAATCCTACGTCCATGTACTTTCCTGGATATCCTGCTACTTTTCCTTCCCAGGGAAATTCACTTGGCCATTACTCAAAGCAGCATCAAAACCAGTTGATTCTGCCATGGAACCAGCAACAAGGGCAGCAATCCTTCCAACAAAGAAGCCTTCAATCCTTAAACCCGCAATATTTGACCTACAAAACCACCTTCGACAGCAACTATCAAAAGGGTCTCAGTAATTTTATGCCTTATCAGGGAACATCCAGGGGTTATAATCAGTCAATTTCCATGCAAAATGAATTGATTTCTCCATGGAATCCGCAAGGTGCTGCAAACACCACACCCAGCTTCCGTGATGGATTCAATATCCTTGGTGGTGGGAATAACTATGCAGGCGCTGGCCAGATTGAAAATGGTGTCGGAACTTTCAATGGAAACGTGCTTCCCTCCAATGTGGGAAATAGTACTACTGGTGGAAACCAAATGCATTCCATGCAGCAACATGTTCCTCAGCAGCCACTGCCGTGGGAGGAGATTGATGAATCATTGGGAATTGAAAATTTACAGTTCAACGATGATGAACATGGGCCTCTGTTCCCAGTTTTACATGAATG 1187 0.396 MSADANESSMVGALERGATRYIAKPIMFSDLGGLWQFATWSKSKEMRKDSEGAKSKKQPEQKVGKNEEGKAIGGQLVFKRKRLTWTKELHQRFMDAINTIGVEKARPKKILQLMNVPGLKKEKVSSYLQISVSQKYRLSLKRQAEARMQRNNITLSQSSLGSDSYNLYQTQNYLPTSKLQSLAYDPNTIYRNYNYPSNPTSMYFPGYPATFPSQGNSLGHYSKQHQNQLILPWNQQQGQQSFQQRSLQSLNPQYLTYKTTFDSNYQKGLSNFMPYQGTSRGYNQSISMQNELISPWNPQGAANTTPSFRDGFNILGGGNNYAGAGQIENGVGTFNGNVLPSNVGNSTTGGNQMHSMQQHVPQQPLPWEEIDESLGIENLQFNDDEHGPLFPVLHE 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00861 395 MobiDBLite consensus disorder prediction 46 67 - -
Bva01g00861 395 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 81 130 IPR006447 GO:0003677
Bva01g00861 395 Gene3D - 77 143 - -
Bva01g00861 395 SUPERFAMILY Homeodomain-like 78 141 IPR009057 -
Bva01g00861 395 MobiDBLite consensus disorder prediction 46 68 - -
Bva01g00861 395 ProSiteProfiles Response regulatory domain profile. 1 39 IPR001789 GO:0000160
Bva01g00861 395 PANTHER RESPONSE REGULATOR 23-RELATED 1 357 - -
Bva01g00861 395 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 357 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00861 Bva-Chr1 6136100 6138122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00861 1 152 Response Regulator Gene Family AT2G01760 31.148 2.05e-20 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva01g00861 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00861 - - minc:123216569 130.183