Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00860 ATGGCGTCTGATAAGTCTCTAGTTGTTGAAATGATCAAATATTCTAGTCCACTGTCTGTCATAAGAGCTTTGGTCGTGGACAGTGATTCCACATGTCTGGAAATTGTCTCAAAAATGCTTCGTGTCCTTGGATATCAAGTTGTAACTGCTAAGAAGGGTGCTGATGCATTAAACATTGTTCAGCAGAAGGGTAATGAGCTTCACCTTGTGCTCATGGAAGCTCACTTGCCTGACATGGAAATAAATGAGCTCATTCAGAAGATCAAACGAATCTCCACATTGCCTTTTTCTAGTAAAGTTCTTCTCGGTTCAATTGTTTG 320 0.4031 MASDKSLVVEMIKYSSPLSVIRALVVDSDSTCLEIVSKMLRVLGYQVVTAKKGADALNIVQQKGNELHLVLMEAHLPDMEINELIQKIKRISTLPFSSKVLLGSIV 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00860 106 SUPERFAMILY CheY-like 21 95 IPR011006 -
Bva01g00860 106 Gene3D - 19 102 - -
Bva01g00860 106 Pfam Response regulator receiver domain 24 92 IPR001789 GO:0000160
Bva01g00860 106 ProSiteProfiles Response regulatory domain profile. 22 106 IPR001789 GO:0000160
Bva01g00860 106 PANTHER TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR8-RELATED 21 96 - -
Bva01g00860 106 PANTHER TWO-COMPONENT RESPONSE REGULATOR 21 96 IPR045279 GO:0009736
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00860 21 95 Response Regulator Gene Family AT2G25180 33.333 3.04e-10 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva01g00860 Response_reg 7.1e-08 CL0304