Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00858 ATGGGTTCTAGTTCCACTATGCGCCAAAACAAGTTGAATCCATTGGAACGCAGGCCGCGTTTGCTGAAAGATTTCCTCGATGAGACTTCCAATTCTTGTTCCTCCAGTGGGTTCAAGTCGTTTCCCAGGAAATCAATTCCCCCGGCAAGTTCTAGCAGTATGCGTACCCTCATAGAAATCGACCTCAATTCCAGGAATTCAAATTCATGGAATTTGAGCAAGTTGTCGTCAAAATCAGCATTCCAAACACTGGTAAATGCCTTCAAGTTCAAGagcatttctctctctaaggTAAAATCTCCCTCGTTTTTATCGCGGAGTCTCTCGCGGAAGCTATCCAGGAGGAACAATTCTTCACGGAGAGAAAACGAGAAAAAAGCGAGCGAAATCAAAATCACGGTGAAAATCAAGGACATCATGCGGTGGAAATCGTTCCGTGACCTGGTGGAGGAGCAATGTCCGTCGTTGGATTTCGCTTTGTCCCCGCAGCATTGCACTACGACCACCGCCACGACGGGCTCCACCAGCAGCTCTAGTTGTAATAGCAATGGCTCGAGCTGGAGCGACAGTGATTTCACCACCACTTCGTGGGACGGTAATTTCGTTGAGGTTGCTCAAAACGACGTCGGCTTCGGTAAAATGTTTTCACCGTTTGTCGGCAAGGGTAAGGATTGGTTGGAAGCGACAACGGGAAAGCTCAGTTACGCCGCGGTGGGGGCCAAGGAAGTATTGAATAGCCAAGAAGATGAAGGACAGAGCCCTGTTTCAGTTCTTGATGTTGGAGAAGATGAATTTTCACCCTTTGATCAAACCCTTGCCAATATTGAAAGGAGAAAGCAAAACTTTATGCAAGCCATTCACAAGCTTGAGAATCTAGCAAAATTGGACTATGAAAATTTAGAGCAATGGCTCTCCCTGAACGAGAACACTGATAAAGACGATGAGGTAGAAAAAATGGCAAGGCAACTGCTGAATTGTGTCaaagcaaaattttctatcCAGAGCTATGAATCCAATCTGCTATTTGATTTCTTCAGGTATGAACTGGatttaagaagaaatcaaactATGAATGATGATGGGTTTGAGTGGGAGATTCTGAAAATGGCAGAAGATTGGATTGATGGTTCATTTGTTTATGAAATTCAGCACAGTAATAGGTGTGCTTATATCAAGGAGATGGATAGAAGGAAAGAATGGAGCAAATTTGAGGAAGATCAACAAGAGTTGGCTTCCCAAATTGGGGATGCTATATTGCATGGTTTGGTTAATGAGTTTCTCTTATATGattttcctta 1298 0.4222 MGSSSTMRQNKLNPLERRPRLLKDFLDETSNSCSSSGFKSFPRKSIPPASSSSMRTLIEIDLNSRNSNSWNLSKLSSKSAFQTLVNAFKFKSISLSKVKSPSFLSRSLSRKLSRRNNSSRRENEKKASEIKITVKIKDIMRWKSFRDLVEEQCPSLDFALSPQHCTTTTATTGSTSSSSCNSNGSSWSDSDFTTTSWDGNFVEVAQNDVGFGKMFSPFVGKGKDWLEATTGKLSYAAVGAKEVLNSQEDEGQSPVSVLDVGEDEFSPFDQTLANIERRKQNFMQAIHKLENLAKLDYENLEQWLSLNENTDKDDEVEKMARQLLNCVKAKFSIQSYESNLLFDFFRYELDLRRNQTMNDDGFEWEILKMAEDWIDGSFVYEIQHSNRCAYIKEMDRRKEWSKFEEDQQELASQIGDAILHGLVNEFLLYDFP 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00858 432 Coils Coil 272 292 - -
Bva01g00858 432 MobiDBLite consensus disorder prediction 1 20 - -
Bva01g00858 432 PANTHER OS04G0572500 PROTEIN 7 428 - -
Bva01g00858 432 PANTHER DUF4378 DOMAIN PROTEIN 7 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00858 Bva-Chr1 6129053 6131334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00858 15 427 TRM (TON1 Recruiting Motif) Superfamily AT4G00770 32.604 9.82e-41 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00858 - - gmx:102661341 296.204