Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00850 ATGGCTGCTCTTCAGAAACACGAAGTTGAGGAAGATCAGAATCCTCGAAACGTTGATCTTAGTCTCAACGGCGGCGGCGCTGGTGGAGGAGACTTCACGACGGGGAACGTTAAGGGACCCAAAGAAGAACCGGAAACGGAGGAGGGATCGCCGGAGGCTGTACGGGTGATGCCGGTGGCGGTTCACGTGCCGACGGGGATGTCCGTGCAAGTAAGCAAAGCTTTGGGTCAACCGCAGAAAAGGGCGTCCACCAAGGACAGGCACACTAAGGTCGAGGGACGAGGACGGAGAATTCGTATGCCCGCCACTTGTGCAGCTCGGATCTTTCAGTTGACCCGGGAATTGGGGCACAAGTCTGACGGCGAGACCATCCGGTGGCTCCTTGAACACGCTGAACCCGCCATCATTGCCGCCACCGGTACAGGAACTATTCCCGCCATCGCCATGTCCGTTAATGGGACCCTCAAAATCCCAACAACCCCttcctccaccaccaccaataACAGTATTAGCAATACCAACAACTCGGATCCCGGCGACCCACCCGGAAAGAAGAAACGAAAGCGACCCGCAAACAGTGTGTATATAGACGTGAATGACGGCGTTTCAGTCTCCGCTGGTCTCGCGCCAATAAGTACAACAACGACGGTGGCAACCAAGCCAATCACCGCCACCACAGCAATTTCTGAGCAAGCGACTCCGTTAGCTCAAGGACTGTTACCCATGTGGGCAATACCATCAAACGCCATCGTTCCGGCGGGGACCTTCTTCGTGGTCCCTCCAATGGCCTCCGTTGCTGGGCCTTCCAACCAGCCACAGTTTTTCACAATCCCAGGCAATGCGGCGCCGTTAATCAACATCTCGGCCAGACCCATCTCAGCTTTTGTCTCCTCCATGGCGAATATCGTCACCCCTATACAGCTCCAAGCAAGCTCCGCTGCCACAACAACTCCATGTTCCGCTGCTCCGGCTTCGAAACCGGCAACTAAAGCAACGGTTACATCGAGCTCTAGCTCTGGTACAACCACAAGCACAACCCCAACCCAGATGCTGAGAGATTTCTCATTGGAGATTTACGATAAGCAAGAGCTTCAGTTCATGTCTCGCTCTTCGAAACATTG 1121 0.5388 MAALQKHEVEEDQNPRNVDLSLNGGGAGGGDFTTGNVKGPKEEPETEEGSPEAVRVMPVAVHVPTGMSVQVSKALGQPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTIPAIAMSVNGTLKIPTTPSSTTTNNSISNTNNSDPGDPPGKKKRKRPANSVYIDVNDGVSVSAGLAPISTTTTVATKPITATTAISEQATPLAQGLLPMWAIPSNAIVPAGTFFVVPPMASVAGPSNQPQFFTIPGNAAPLINISARPISAFVSSMANIVTPIQLQASSAATTTPCSAAPASKPATKATVTSSSSSGTTTSTTPTQMLRDFSLEIYDKQELQFMSRSSKH 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00850 373 MobiDBLite consensus disorder prediction 158 191 - -
Bva01g00850 373 MobiDBLite consensus disorder prediction 1 52 - -
Bva01g00850 373 MobiDBLite consensus disorder prediction 1 15 - -
Bva01g00850 373 MobiDBLite consensus disorder prediction 158 179 - -
Bva01g00850 373 ProSiteProfiles TCP domain profile. 84 138 IPR017887 -
Bva01g00850 373 MobiDBLite consensus disorder prediction 72 94 - -
Bva01g00850 373 MobiDBLite consensus disorder prediction 317 349 - -
Bva01g00850 373 Pfam TCP family transcription factor 83 177 IPR017887 -
Bva01g00850 373 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 39 373 IPR005333 GO:0003700
Bva01g00850 373 PANTHER TRANSCRIPTION FACTOR TCP9 39 373 - -
Bva01g00850 373 MobiDBLite consensus disorder prediction 80 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00850 Bva-Chr1 6096366 6098020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00850 1 373 TCP Transcription Factor Family AT2G45680 49.127 1.58e-98 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva01g00850 TCP 3.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00850 - - tcc:18614241 381.719