Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00849 ATGGATAACTATGGGTCTTCTCATCCATATGGATATCAGAATCCAAATAACTACCCTCAATaccctcctcctcctcctcctatGTATCCACCGCCTCCACATGTAGATCCATATGCACCTCCTCCTTACCCATATCAATTTGGCCACTCAAATTCCTTCAACTACGCCTACCCTCCTCCACCCCCATCATCCACCCATTCTGGCCCCTTAGACTATAACCAACCTCCACCAGCTTATTCAGCTGCTCCATATCCTCCCCACCACTATCCAGCTCCTCCATTGAGTCAGCATAGTGATCTTCATCGGCCTCCCCTTTCACACAATAGCAGTTTTGTGTATGGATCATCTGATTACAGTTACCAACAACATGAAGCATCCGCACCTCCTGAAAACCAATCTCCAGGCTATTCACATGCCAATAGCTTCCCAGCCCCAGGTCCTTACCGGCAGGACAGCATAAGCTCCACTGGTGGTGGATTACCCCAGACTAATGATGGATCCAGACCTTCTCGTAGCTCTGCTTACCCACCTTTAGATGATTTGATGGCCAATGTTCGTTTGACTGATGACCATCAAACTGCTCCTGCATCACCTCCTGCACCTGCAGTGCCACCATTGACACATTCGGTTTCAGTTCCAAGGCAAGATAGGGAAGAGGACTTTTATGGTTCTCCTAATAACTCCTTCTCAGGTTGGGGATCATCCTACTCTGGCCGGGTGGATTCGTCTCAGCTTTCAGCCTATTCAGGCTCGTTTAATGATTCAATACATGGTCAGAGCATGCAGATTGTTCCTTTGCAGAGTAAAGGGTCCTTGAAAGTTTTGCTTCTACATGGAAATTTAGATATATGGGTTTATGGAGCAAAGAATCTTCCAAACATGGATATGTTCCATAAGACTTTGGGAGATATGTTTAGTAAATTACCTGTGAATATTAGCAACACTGTGAGTAAGAAGATTACCAGTGATCCTTATGTTACAATTTCAATAGCAAATGCGGTAATTGGGAGGACTTTTGTGATTAGCAACAGTGAAAATCCTGATTGGATGCAACATTTCTATGTTCCTGTTGCACATAATGCTGCCGAAGTCCACTTTGTTGTCAAGGACAGTGATGTTGTAGGTTCACAAGTCATAGGCATTGTGGCCATTCCAGTGGAACAAATATACTCAGGGGCAAGAATAGAAGGGACCTACCCTATCCTGAATAGTAGTGGCAAGCCCTGCAAGCAGGGTGCTGTCTTGAGCCTATCCATCGAGTACAATCCAATGGAGAAACTGAGCATTTATCAAGGAGTTGGAGCAGGACCTGACTACGCTGGAGTTCCAGGAACATATTTTCCTCTCAGGAAAGGTGGAACTGTTACACTATATCAAGATGCCCACGTACCAGATGGAGTCCTCCCTAATGTGCTGCTTGATCAAGGGACGTATTATGCACATGGAAACTGTTGGCAAGACATCTTTGATGCGATAAGTCAAGCTCGGCGCTTGATCTATATTACAGGGTGGTCAGTGTGGCACAAAGTACAGCTTGTACGTGATGCTAATTATCCATCCGAATATACCCTGGGTGATCTCCTCAGGTCTAAGTCACAGGAAGGAGTAAGGGTGCTTCTTCTTGTCTGGGATGACCCAACATCAAGGAACATTCTGGGTTATAAAACAGATGGTGTCATGGCCACTCATGATGAGGAAACTCGACGATTTTTCAAACACTCTTCTGTGCAAGTGCTGCTTTGTCCCCGCTCTGCTGGAAAGCGACACAGCTGGATAAAGCAAAGGGAAGTTGGAACAATATATACACATCATCAGAAAACTGTAATTGTGGATGCTGATGCCGGCaacaacagaagaaaaattattgcatTTGTTGGTGGACTGGATCTGTGTGATGGGCGATATGATACTCCCAACCATCCGCTCTTTAGGACACTTCAGACACTGCACAAGGATGATTATCACAACCCTACTTTTACGGGTAATACTGGTGGTTGTCCACGGGAGCCATGGCATGACTTGCACTCTAAAATTGATGGTCCAGCAGCATATGATGTTCTGGACAACTTTGAGAAGCGATGGCTTAAAGCTGCAAAACCTCATGGtattaaaaagttgaaaatgtcATATGATGACGCTTTACTCAGACTGGAAAGAATACCAGATATTGTTGGCTTTTCTGAGGCGGTTAGTGTTAACAATAATAATCCTGAATCTTGGCATGTTCAGATATTTCGTTCAATAGATTCCAATTCTGTCAAGGGATTCCCAAAGGATGGAAAAGATGCATCAAGCCAgAACTTAGTATGCGGAAAGAATGTGCTCATTGACATGAGCATACATACGGCATATGTGAAGGCAATTCGTGCTGCAcaacattatatttatatagagaATCAATATTTCATTGGGTCCTCCTTCAATTGGAGTCAACATAGAGACCTTGGTGCCAATAACTTAATTCCGATGGAAATAGCCCTAAAGATTGCTGAAAAGATAAGGGCAAATGAGAGATTCGCTGTGTATATTGTTATTCCTATGTGGCCAGAGGGCGTTCCAACAGGGAATGCCACACAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTATGAGACAATATACAAGGCATTGGTTGAGGTTGGGCTTGAAGCAGTATACACTCCACAAGACTACCTGAACTTTTTCTGTCTTGGAAATCGAGAGATCATGGATATGTCTGAAAATACAACGGCTGGAGCAGCTCCTCCAGTAAATAGTTCCCAAGCACATAGTAAAAGAAACCGGCGTTTCATGATTTATGTTCATTCGAAAGGCATGATCGTTGATGATGAGTATGTGATATTGGGGTCTGCAAACATCAACCAGCGCTCTATGGAAGGAACAAGGGACACTGAGATTGCAATGGGAGCTTACCAACCTCAACATACCTGGGCAAGAAAACATTCTTATCCACATGGAGAGATTCATGGATATAGAATGTCGCTTTGGGCTGAACATACAGGAACAATTGAAGAGTGTTTCTTGCAACCAGAGAGTCTTGAATGTGTAAGAAGGGTTAGAGAAATGGGGGAAATCAACTGGAGACAGTTTGCTGCAGATGATATAACAGAGATGAGAGGGCATCTGCTTAAATACCCGGTAGAAGTTGATCTAAAGGGCAAGGTTAAACCACTTCCTGGACATGAAGAATTCCCTGATGTAGGAGGGAAAATAGTTGGATCTTTCATTGCCATTCAGGAGAACTTAACCATTTG 3263 0.4275 MDNYGSSHPYGYQNPNNYPQYPPPPPPMYPPPPHVDPYAPPPYPYQFGHSNSFNYAYPPPPPSSTHSGPLDYNQPPPAYSAAPYPPHHYPAPPLSQHSDLHRPPLSHNSSFVYGSSDYSYQQHEASAPPENQSPGYSHANSFPAPGPYRQDSISSTGGGLPQTNDGSRPSRSSAYPPLDDLMANVRLTDDHQTAPASPPAPAVPPLTHSVSVPRQDREEDFYGSPNNSFSGWGSSYSGRVDSSQLSAYSGSFNDSIHGQSMQIVPLQSKGSLKVLLLHGNLDIWVYGAKNLPNMDMFHKTLGDMFSKLPVNISNTVSKKITSDPYVTISIANAVIGRTFVISNSENPDWMQHFYVPVAHNAAEVHFVVKDSDVVGSQVIGIVAIPVEQIYSGARIEGTYPILNSSGKPCKQGAVLSLSIEYNPMEKLSIYQGVGAGPDYAGVPGTYFPLRKGGTVTLYQDAHVPDGVLPNVLLDQGTYYAHGNCWQDIFDAISQARRLIYITGWSVWHKVQLVRDANYPSEYTLGDLLRSKSQEGVRVLLLVWDDPTSRNILGYKTDGVMATHDEETRRFFKHSSVQVLLCPRSAGKRHSWIKQREVGTIYTHHQKTVIVDADAGNNRRKIIAFVGGLDLCDGRYDTPNHPLFRTLQTLHKDDYHNPTFTGNTGGCPREPWHDLHSKIDGPAAYDVLDNFEKRWLKAAKPHGIKKLKMSYDDALLRLERIPDIVGFSEAVSVNNNNPESWHVQIFRSIDSNSVKGFPKDGKDASSQNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSFNWSQHRDLGANNLIPMEIALKIAEKIRANERFAVYIVIPMWPEGVPTGNATQRILFWQNKTMQMMYETIYKALVEVGLEAVYTPQDYLNFFCLGNREIMDMSENTTAGAAPPVNSSQAHSKRNRRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPQHTWARKHSYPHGEIHGYRMSLWAEHTGTIEECFLQPESLECVRRVREMGEINWRQFAADDITEMRGHLLKYPVEVDLKGKVKPLPGHEEFPDVGGKIVGSFIAIQENLTI 1087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00849 1087 MobiDBLite consensus disorder prediction 76 92 - -
Bva01g00849 1087 Pfam C2 domain 279 401 IPR000008 -
Bva01g00849 1087 SMART C2_3c 280 398 IPR000008 -
Bva01g00849 1087 MobiDBLite consensus disorder prediction 1 15 - -
Bva01g00849 1087 MobiDBLite consensus disorder prediction 16 44 - -
Bva01g00849 1087 CDD C2_plant_PLD 273 421 - -
Bva01g00849 1087 SMART pld_4 933 960 IPR001736 GO:0003824
Bva01g00849 1087 SMART pld_4 599 634 IPR001736 GO:0003824
Bva01g00849 1087 Gene3D Endonuclease Chain A 748 988 - -
Bva01g00849 1087 Gene3D C2 domain 274 416 IPR035892 -
Bva01g00849 1087 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 933 960 IPR001736 GO:0003824
Bva01g00849 1087 MobiDBLite consensus disorder prediction 1 178 - -
Bva01g00849 1087 PANTHER PHOSPHOLIPASE D 205 1087 IPR015679 -
Bva01g00849 1087 PANTHER PHOSPHOLIPASE D ALPHA 1 205 1087 - -
Bva01g00849 1087 Pfam Phospholipase D Active site motif 600 634 IPR001736 GO:0003824
Bva01g00849 1087 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 277 422 IPR035892 -
Bva01g00849 1087 MobiDBLite consensus disorder prediction 147 171 - -
Bva01g00849 1087 Pfam Phospholipase D C terminal 1007 1077 IPR024632 -
Bva01g00849 1087 Gene3D Endonuclease Chain A 474 714 - -
Bva01g00849 1087 SUPERFAMILY Phospholipase D/nuclease 445 698 - -
Bva01g00849 1087 MobiDBLite consensus disorder prediction 101 139 - -
Bva01g00849 1087 Pfam PLD-like domain 785 969 IPR025202 -
Bva01g00849 1087 ProSiteProfiles C2 domain profile. 261 399 IPR000008 -
Bva01g00849 1087 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 599 634 IPR001736 GO:0003824
Bva01g00849 1087 SUPERFAMILY Phospholipase D/nuclease 732 1019 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00849 Bva-Chr1 6089053 6094912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00849 63 1087 Phospholipase D Gene Family (Wang group) AT2G42010 69.717 0.0 1474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00849 K01115 - gmx:100791059 1652.88