Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00848 ATGGTTCAGCCAGTGGAATTAGACACTCTTCAAGGATTGCAGCTTACAAAGTGTGCTGGCCTTTGTGGTTGTACCAACTCTGATATATTGGCAGCTATAGACCAAGCTGTTGCTGATGGTGTTGATATATTGTCACTCTCTCTAGGCGGCATAGCTAGACCTTATTATAATGATAGCATTGCCATTGCCTCATTTGGGGCAACCCAAAATggagtttttgtttcttgctcTGCAGGCAATTCAGGGCCCTCTAAATCAAGTGTTGAAAATGTTGCCCCATGGATCATGACTGTGGCTGCAAGCTACACTGACAGAAGCTTTCCAACAACAGTGAAGCTCGGGAATGGGCAGATTTTTAAAGGGTCGTCTTTATACCGTGGCAATCCAACAAATCAATTGCTGCTTGCCTATGGCAATAAATCCGCAGGATCACAAAGATTGTCTCGGTTTTGCATCAGAGGCTCACTTGATCCGAAGCTTGTTCATGGAAAAATAGTCTTTTGTGAAAGAGGGATAAATGGCCGAACCGAGAAGGGTGAGATTGTGAAAATGGCAGGTGGGGCAGGAATGTTACTAATAAACAGTGAAAACCAAGGAGAAGAGCTCTTTGCTGATCCTCACATTTTACCAGCCAGTTCCTTAGGGGCCTCAGCCGGTGAGATCATCAAAAGCTACCTTCTCTCAGAAAAAAAACCAACAGCTTCAATTTCCTTTAAAGGGACAATGTATGGAAACCCTGCACCAGTAATGGCAGCATTTTCTTCTAGAGGGCCAAGTATAGTGGGACCAGATGTGATTAAACCGGATTTAACTGCGCCTGGTGTGAACATCATGGCTGCTTGGCCACCCATAACTAGTCCAAGCTTGCTCAAGAACGACAAAAGAAGAGTACTGTTTAACATTATCTCAGGCACCTCAATGTCTTGCCCTCATGTCAGTGGCATAGCCGCACTGATTAAATCTGTGCATAAAGATTGGTCACCTGCAGCTATCAAATCTGCTTATGTATCAGACAACAAAGGAGCTCCAATTGCTGATTTTGGTTCAGATAATTCAGAAAATGCTGACCCTTTTGCACTTGGTTCAGGCCATGTTAACCCAGAAAGTGCTTCTGATCCAGGGTTAGTCTATGACATCACCACAGAAGATTACTTAAACTATTTGTGCAGCCTAAAATTTACCACTTCCCAGATTGCTTTGTTGTCAAGGGGTAATTTTACATGCCCAGAAAAAGCACTTCTTCAAGCTGGTGACTTGAACTACCCTTCAATATCAGTGCTTTTCAACATAAATGCTCAAAATGCTACTTTGACATACCAGAGGACAGTCACAGATGTGGGAATTCCTGAAAGTGCTTATGCAGTGGAAGTTGAAGAACCAAAGGGAGTATCAGTTACAGTTACACCAAGGTCTTTAAAGTTTGACAAATTGGGTCAGAAACTGAGTTACAAGGTGACTTTTGTTTCATATGAAACGCAAAGTGTTGCTGGTGTTTCAAAGTTTGGGTCACTTATTTGGGTATCTGGAAAATATAGAGTTAGAAGTCCAATAGCAGTAACTTGGCAATA 1568 0.4203 MVQPVELDTLQGLQLTKCAGLCGCTNSDILAAIDQAVADGVDILSLSLGGIARPYYNDSIAIASFGATQNGVFVSCSAGNSGPSKSSVENVAPWIMTVAASYTDRSFPTTVKLGNGQIFKGSSLYRGNPTNQLLLAYGNKSAGSQRLSRFCIRGSLDPKLVHGKIVFCERGINGRTEKGEIVKMAGGAGMLLINSENQGEELFADPHILPASSLGASAGEIIKSYLLSEKKPTASISFKGTMYGNPAPVMAAFSSRGPSIVGPDVIKPDLTAPGVNIMAAWPPITSPSLLKNDKRRVLFNIISGTSMSCPHVSGIAALIKSVHKDWSPAAIKSAYVSDNKGAPIADFGSDNSENADPFALGSGHVNPESASDPGLVYDITTEDYLNYLCSLKFTTSQIALLSRGNFTCPEKALLQAGDLNYPSISVLFNINAQNATLTYQRTVTDVGIPESAYAVEVEEPKGVSVTVTPRSLKFDKLGQKLSYKVTFVSYETQSVAGVSKFGSLIWVSGKYRVRSPIAVTWQ 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00848 522 Gene3D - 388 521 - -
Bva01g00848 522 Pfam PA domain 148 221 IPR003137 -
Bva01g00848 522 CDD PA_subtilisin_like 110 236 - -
Bva01g00848 522 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.1 21 522 - -
Bva01g00848 522 Pfam Fibronectin type-III domain 418 519 IPR041469 -
Bva01g00848 522 ProSitePatterns Serine proteases, subtilase family, serine active site. 304 314 IPR023828 -
Bva01g00848 522 Gene3D Peptidase S8/S53 domain 22 384 IPR036852 GO:0004252|GO:0006508
Bva01g00848 522 SUPERFAMILY Subtilisin-like 18 375 IPR036852 GO:0004252|GO:0006508
Bva01g00848 522 Pfam Subtilase family 22 339 IPR000209 GO:0006508|GO:0008236
Bva01g00848 522 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 522 IPR045051 -
Bva01g00848 522 ProSiteProfiles Serine proteases, subtilase domain profile. 1 371 - -
Bva01g00848 522 Gene3D - 104 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00848 Bva-Chr1 6086087 6087655 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00848 23 522 Subtilisin-like Serine Gene Family AT1G01900 57.396 0.0 566