Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00836 ATGGCATCCCGTCAGTCCCTGCCACCACCTCCGCCGGTGGTGTCATCTTCTACTTCGCCGAGCCACCACCATCACCACCTCCAGCAAGTAATCCTCGGGGGGGTTCTGGGTCTTGCTTTTCTGTTCCTAATCTTCATCGTCTTCCTCATATTCTTTATCTACCGCAAGCTCTCCTACAACCGCACCGCACCGTTCGACCACTACAACCACCACCAGCACCGCCGCTTCTCCTACACGCTCCTCCGACGCGCGACCAACTCGTTTTCTCCTGCCACCAAGCTTGGCCATGGTGGGTTCGGTTCCGTTCACAAGGCTACCCTCCCTTCAGGTCAATCCGTGGCTCTGAAGCTCATGGACTCCCCTGGTTCATTGCAAGGAGAGCGTGAGTTCCACAACGAGCTTTCACTCTCTTCGCAGCTCAACTCCCCTTTTATACTCTCCCTTCTGGGATTCTCCACTGATCGTAGaggaaaaaaactaattttggTATATGAGCTCATGCCTAATCGCAGTTTGCAGGACGCGTTGTTGGATAGAAAGTGTGTGGAGCTCATGGAGTGGAAGAAGAGGTTCAATATCGCTATTCACATCGCAAAGGGTATTGAATATCTTCACCATTATTGCAACCCGCCGGTGATTCATGGGGATATCAAGCCCAGTAACGTGTTGCTGGATTCCGATTTCTCAGCCAAGATAGGGGATTTTGGGCTCGCAAGGTTGAAAACAGAGGAACTGGAAATGGTGGAAGAGAATGGTGGAGAGTGTGAGAGTACGAAGAAGAAGGAAGTGGTTGTGGAGCTAGGGGACGAAAATGGGTCCCTTTTGGAAGAGGTGGAGAGTGTAACTACTGGGTATGACGAAGGTAGTGCAATGATTGATCGGTCGCCAGAGAGTTGCATGGTTAGGATTTTGGATCCAGGGGCTTCGCCGGGAACGGTGTTTCTGTCGCCGGAAGTGGGCGTTGATAAATCTAGTGTTTCAGAGGGAACCTTTGATAAATTTAGCATTGACAGTGGGAAAGATTTGACTGCAAATAATCGGAAGAAGGGTGGTTCTGGCAGGGATTGGTGGTGGAAACAAGACAATGGTGGAGGCTCCGAATCAGGGAGGGTGAAAGACTATGTAATGGAGTGGATCGGAAGTGAGATACAGAAGGAGAGACCTAAGAGTGAATGGGTCGCGTCTCCAAGCTCTACAGAGCCTAATGGGGCAACTCCAAAAATGGAGTcgaagaagcagaagaagaaactgGATTGGTGGGCCTCCTTGgatgaagaaaaagtgaagaagaaggagaagaatcGAAAGCCAAGGGAATGGTGGAAGGAGGAGTTCTGTGAGGAGCtctcaaagaagaagaaaaaacgaAATCTTGATTCCAATTGTGGCAGCGAATCATGGTGGCAGAAAGATGAGGATGTGGTtccagagaagaaaaagaagaggaagagcaAGAGTAGCAGAGGTAGCATTGATTGGTGGTTGGATGGTTTGAGTGGTGAACTcagaaatggaagaagaaatagcCAAGATTGGGTTAGTGGGGATATTCCCAAGAGTGGTGGAATCAGCAGCACCCCAAGTATGAGAGGAACTGTTTGTTATATTGCTCCTGAGTATGGTGGTGGTGGGCAGCTCTCAGAGAAGTGTGATGTCTATAGTTTTGGTGTACTGCTTTTGGTTTTGATAGCCGGAAGAcgacctcttcaagtaacaGCTTCACCAATGTCAGAATTTGAAAGGGCTAATCTGATTTCATGGGCTAGGCAACTTGCTCACAATGGCAGGCTTTTGGATCTCGTTGATCCTTCCATTCATTCATTAGACAAGGAGCAGGCATTGCTTTGCATTACAATTGCCTTGTTATGTCTTCAGAGATCGCCCGGGAAGCGGCCTAACATGAAAGACATTGTAGAAATGCTCTGTGGTGAGGCTGAGCCACCCCACTTACCTTTCGAGTTCTCACCATCGCCGCCGTCCAATTTTCTGTTCAAGTCCCGGAAGAAGGCTCGGTG 2015 0.4576 MASRQSLPPPPPVVSSSTSPSHHHHHLQQVILGGVLGLAFLFLIFIVFLIFFIYRKLSYNRTAPFDHYNHHQHRRFSYTLLRRATNSFSPATKLGHGGFGSVHKATLPSGQSVALKLMDSPGSLQGEREFHNELSLSSQLNSPFILSLLGFSTDRRGKKLILVYELMPNRSLQDALLDRKCVELMEWKKRFNIAIHIAKGIEYLHHYCNPPVIHGDIKPSNVLLDSDFSAKIGDFGLARLKTEELEMVEENGGECESTKKKEVVVELGDENGSLLEEVESVTTGYDEGSAMIDRSPESCMVRILDPGASPGTVFLSPEVGVDKSSVSEGTFDKFSIDSGKDLTANNRKKGGSGRDWWWKQDNGGGSESGRVKDYVMEWIGSEIQKERPKSEWVASPSSTEPNGATPKMESKKQKKKLDWWASLDEEKVKKKEKNRKPREWWKEEFCEELSKKKKKRNLDSNCGSESWWQKDEDVVPEKKKKRKSKSSRGSIDWWLDGLSGELRNGRRNSQDWVSGDIPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLIAGRRPLQVTASPMSEFERANLISWARQLAHNGRLLDLVDPSIHSLDKEQALLCITIALLCLQRSPGKRPNMKDIVEMLCGEAEPPHLPFEFSPSPPSNFLFKSRKKAR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00836 671 PANTHER OS07G0586332 PROTEIN 2 671 IPR044576 -
Bva01g00836 671 ProSiteProfiles Protein kinase domain profile. 88 652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00836 671 MobiDBLite consensus disorder prediction 385 416 - -
Bva01g00836 671 MobiDBLite consensus disorder prediction 343 367 - -
Bva01g00836 671 Pfam Protein kinase domain 91 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00836 671 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Bva01g00836 671 SMART serkin_6 88 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva01g00836 671 Gene3D Transferase(Phosphotransferase) domain 1 167 268 - -
Bva01g00836 671 Gene3D Transferase(Phosphotransferase) domain 1 497 647 - -
Bva01g00836 671 MobiDBLite consensus disorder prediction 652 671 - -
Bva01g00836 671 MobiDBLite consensus disorder prediction 391 406 - -
Bva01g00836 671 Gene3D Phosphorylase Kinase; domain 1 61 166 - -
Bva01g00836 671 SUPERFAMILY Protein kinase-like (PK-like) 65 660 IPR011009 -
Bva01g00836 671 MobiDBLite consensus disorder prediction 1 21 - -
Bva01g00836 671 PANTHER OS07G0586332 PROTEIN 2 671 - -
Bva01g00836 671 ProSitePatterns Protein kinases ATP-binding region signature. 94 116 IPR017441 GO:0005524
Bva01g00836 671 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00836 Bva-Chr1 6009213 6011623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00836 519 641 Receptor kinase-like Gene Family AT3G58690 37.984 2.69e-16 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Bva01g00836 Pkinase 6.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00836 - - jre:108999501 889.797