Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00833 ATGACGCCTCCCGTCGTGGAGACCCTCACGGCCTATGCTCTCCTCATCACCGCCGCCTCAGCCGCCGGATACTCCAATCACACAGTTGGCGGTAAACTCGGCTGGTTCTTCAACGCCACCACCAACACTTCTGCCACGAATTACACTGCTTGGGCAGCAGCTCAAACCTTCGCTCTTGGCGATTATCTCATTTTCAACACCAACTCGAATCAGACCGTGATTCAGACTTACAACCAGACCACTCTCCGGAGTTGCTCCGCCGATGATTCCGACAACGGTACCTTCCAATACAACGGCGGCATTACTAATTTCGGCGAGGCGTTGACCATCGCTTTTCCGTTGACCATCGAGGGCCCCAACTACTACTTCTCGGACGCTGGAGACGGCATCCAGTGCCAACATGGTTTGGCCTTTCAGATCAACGTGACGCACGGTCTGGGCTTACCCCCGAGCCTCAACCAACCGCCACCTCCACCGTACATTGCGCCGCCTAGTCCTGATACGGCTGAGTCTCCGCTGGGCACGGTCTTGTTTCCACCCCCAAACGACGCCGTTGCCTCCCACTATGACGTGCGCTGGGCGCTATACTGTTTTGTCGCGGTACTGATATTCTTACGGTG 620 0.5645 MTPPVVETLTAYALLITAASAAGYSNHTVGGKLGWFFNATTNTSATNYTAWAAAQTFALGDYLIFNTNSNQTVIQTYNQTTLRSCSADDSDNGTFQYNGGITNFGEALTIAFPLTIEGPNYYFSDAGDGIQCQHGLAFQINVTHGLGLPPSLNQPPPPPYIAPPSPDTAESPLGTVLFPPPNDAVASHYDVRWALYCFVAVLIFLR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00833 206 Gene3D - 24 145 IPR008972 -
Bva01g00833 206 ProSiteProfiles Phytocyanin domain profile. 25 144 IPR003245 GO:0009055
Bva01g00833 206 Pfam Plastocyanin-like domain 43 135 IPR003245 GO:0009055
Bva01g00833 206 PANTHER OS12G0454600 PROTEIN 17 176 - -
Bva01g00833 206 PANTHER BLUE COPPER PROTEIN 17 176 IPR039391 GO:0009055
Bva01g00833 206 SUPERFAMILY Cupredoxins 26 142 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00833 Bva-Chr1 5996511 5997636 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00833 5 204 Phytocyanin Superfamily AT1G08500 34.513 3.56e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00833 - - gmx:100783106 236.884