LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva01g00825	ATGGATTACCTAGCAATTCTGCTGCTGGTTTCCTTCTCATGCGCCTTAATTCATATCTTTATCTCCAGCAGCAACAAGCGGCGCTGCCATCCTCCGGGGCCCCGCCCACTTCCGATCATCGGAAACATCTTGGTACTCGGCAGCAATCCTCACCGGTCACTGGCTAAACTCTCCAAAACATTCGGACCCATAATGACTCTGAAACTGGGCAGCAGAACCACCATAGTTATCTCCTCTCCCGACATGGCCGAGGAAGtactaaagaaaaaagaccaagCCTTTTCCAGCAGAACGGCCCCTGATGTAACCCGTGTACTTAACCACCGCCAGTTTTCGATGGTGTGGTTGCCTGCTTCGGCCAAATGGAGGTCCCTTAGAAGAGCTTGTGCGACAAAAATCTTCTCCCCTCAACAGCTTGACACCACGCAAATTCTAAGGGAAAAAAAGGTGCAAGAGTTGCTTGATTTCGCTGGCGAAATCTGCAAAAATGGTGAAGCTTTGGATATTGGTGAGGCTGTTTTTGCAACAACACTCAATTCCTTATCAAACACGTTGTGCTCTGTTGATTTGGTTAGTTTGAATTCTGATTTGTCTCAAGAATTTAAGGATGTTGTGTGGAGAATTATGGAAGAAACTGGAAAGCCTAATGTTGTTGACTTTTTCCCAATTCTTCGTCCGTTTGACCCTCAGAGAGCTTATGCAAAAAGTAAGATTTACTTTGGCaagtttcttaaatattttgatgggATTATTGAAGAAAGGATCCGTTCAAGAACTTCAGAAGTAGAATCTAAGGAGTACAATGATGTGTTGGATTCATTTCTTAATGTCTCAGAAGAAGACAGTTCTCACTTAAGCCACCTTGACCTGTTGCATTTATTTGTGGATTTATTTGCTGCCGGAACAGAAACAACATCAATCACAATAGAATGGCTCATTACACTCCATGACAACTCATTGCACTACATAGTCTCTCAACCATTTGGGTTTGGTGGTATTGCGCTTAGCTCTAATTTGGGAAACCTTGTGGATTGTTTCCTTATTTGGGCTTA	1052	0.4211	MDYLAILLLVSFSCALIHIFISSSNKRRCHPPGPRPLPIIGNILVLGSNPHRSLAKLSKTFGPIMTLKLGSRTTIVISSPDMAEEVLKKKDQAFSSRTAPDVTRVLNHRQFSMVWLPASAKWRSLRRACATKIFSPQQLDTTQILREKKVQELLDFAGEICKNGEALDIGEAVFATTLNSLSNTLCSVDLVSLNSDLSQEFKDVVWRIMEETGKPNVVDFFPILRPFDPQRAYAKSKIYFGKFLKYFDGIIEERIRSRTSEVESKEYNDVLDSFLNVSEEDSSHLSHLDLLHLFVDLFAAGTETTSITIEWLITLHDNSLHYIVSQPFGFGGIALSSNLGNLVDCFLIWA	350

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva01g00825	350	SUPERFAMILY	Cytochrome P450	26	313	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bva01g00825	350	PANTHER	CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED	1	314	-	-
	Bva01g00825	350	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	1	314	-	-
	Bva01g00825	350	PRINTS	E-class P450 group I signature	82	103	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bva01g00825	350	PRINTS	E-class P450 group I signature	58	77	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bva01g00825	350	PRINTS	E-class P450 group I signature	289	306	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bva01g00825	350	Pfam	Cytochrome P450	31	314	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Bva01g00825	350	Gene3D	Cytochrome P450	16	317	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva01g00825	Bva-Chr1	5953080	5956517	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva01g00825	5	314	Cytochrome P450	AT2G45550	42.138	7.35e-76	241

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva01g00825	-		K15099	gmx:100809483	363.614

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva01g00825	01	5953080	5956517	Bva01g00825	01	5953080	5956517	ECH