Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva01g00818 ATGGTGCCTTTCACCGGTGCGTATTTTGGATTCCCAATGGATTTTCCGGCGAGGACAGAATACATGAGAAAACAGAACGGCAGCAAGAGACCCAAAACCGGGAAGGTTACCATCAAAGTCAACGGCCGTTCATACCATCAAGCAAAGCCTGTTGTAGCGTTCTTTCTCAATTTGCGGTTCTCAGCGCTCTTCCAGCATTCATTTTGCAAGATGCAAATCTTCGTGAAAACTCTGACTGGAAAAACGATCACCCTTGAGGTGGAGAGCTCCGATACAATTGATAATGTCAAAGCTAAGATTCAAGACAAGGAAGGCATCCCGCCAGACCAACAGAGGCTTATCTTTGCCGGAAAACAACTCTTGCTGACTATAACATCCAAAAGGAATCGACCCTCCACCTTGTCCTTCGTCTCAGAGGAGGCATGCAAATTTTTGCGAAGACTTTG 446 0.4619 MVPFTGAYFGFPMDFPARTEYMRKQNGSKRPKTGKVTIKVNGRSYHQAKPVVAFFLNLRFSALFQHSFCKMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLLLTITSKRNRPSTLSFVSEEACKFLRRL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva01g00818 148 ProSiteProfiles Ubiquitin domain profile. 71 120 IPR000626 GO:0005515
Bva01g00818 148 PANTHER - 71 120 - -
Bva01g00818 148 PANTHER UBIQUITIN 71 120 - -
Bva01g00818 148 SMART ubq_7 71 139 IPR000626 GO:0005515
Bva01g00818 148 Gene3D - 70 120 - -
Bva01g00818 148 Pfam Ubiquitin family 73 120 IPR000626 GO:0005515
Bva01g00818 148 PRINTS Ubiquitin signature 81 101 IPR019956 -
Bva01g00818 148 PRINTS Ubiquitin signature 102 122 IPR019956 -
Bva01g00818 148 SUPERFAMILY Ubiquitin-like 69 120 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva01g00818 Bva-Chr1 5910744 5911940 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva01g00818 71 120 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 100.000 9.60e-30 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva01g00818 - K02927 pda:120110580 106.686